RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ECT2LQ008S8 904 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 SEMA3BQ13214 749 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 ELAVL3Q14576 367 aaKnown RBP13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 HNRNPA1L2Q32P51 320 aaKnown RBP13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 DCAF12L1Q5VU92 463 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 OXR1Q8N573 874 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 SNX19Q92543 992 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 SLC39A13Q96H72 371 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 OMDQ99983 421 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 TUBGCP2Q9BSJ2 902 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 MKRN2Q9H000 416 aaKnown RBP13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 KDM4CQ9H3R0 1056 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 CD248Q9HCU0 757 aa13.3□□□□□ -0.28
SNORD88B-201ENST00000408454 VPS13AQ96RL7 3174 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ALOX15BO15296 676 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 SLC7A4O43246 635 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 GADD45BO75293 160 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 TACR2P21452 398 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 C5AR1P21730 350 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 PRKCHP24723 683 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 C21orf59P57076 290 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ZNF177Q13360 481 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 FAM133BQ5BKY9 247 aaKnown RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 OR6B2Q6IFH4 312 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 SLC26A9Q7LBE3 791 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ADIPOR2Q86V24 386 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ZSCAN30Q86W11 494 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 LGI2Q8N0V4 545 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ZNF397Q8NF99 534 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 FCRL2Q96LA5 508 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 CNTNAP3BQ96NU0 1288 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 RPRD1AQ96P16 312 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 SPAG5Q96R06 1193 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ACE2Q9BYF1 805 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 CNTNAP3Q9BZ76 1288 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 RSPH9Q9H1X1 276 aaPredicted RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 RXFP3Q9NSD7 469 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 DONSONQ9NYP3 566 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 DNAJC12Q9UKB3 198 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ATXN2Q99700 1313 aaKnown RBP13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 EML5Q05BV3 1969 aa13.29□□□□□ -0.28
SNORD88B-201ENST00000408454 ANKRD62A6NC57 917 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 WASH3PC4AMC7 463 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 PIK3R2O00459 728 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 PAPSS1O43252 624 aaPredicted RBP13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 DAB1O75553 588 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 CD27P26842 260 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 PON1P27169 355 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 CSKP41240 450 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 RECQLP46063 649 aaPredicted RBP13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 COPAP53621 1224 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 GEMIN4P57678 1058 aaKnown RBP13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 SIM1P81133 766 aaPredicted RBP13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 SLC6A3Q01959 620 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 RAPGEF1Q13905 1077 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 PITRM1Q5JRX3 1037 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 RFWD3Q6PCD5 774 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 TRIM72Q6ZMU5 477 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 TAC4Q86UU9 113 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 SLC41A1Q8IVJ1 513 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 OR8D1Q8WZ84 308 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 NDRG1Q92597 394 aaKnown RBP13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 KAT5Q92993 513 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 C18orf8Q96DM3 657 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 NAT10Q9H0A0 1025 aaKnown RBP13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 DYRK4Q9NR20 520 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 TMEM74BQ9NUR3 256 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 NAALADL1Q9UQQ1 740 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 NEUROG3Q9Y4Z2 214 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 ITIH6Q6UXX5 1313 aa13.28□□□□□ -0.28
SNORD88B-201ENST00000408454 ATG2BQ96BY7 2078 aa13.27□□□□□ -0.28
SNORD88B-201ENST00000408454 CXorf51AA0A1B0GTR3 108 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 PLK1P53350 603 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 RACK1P63244 317 aaKnown RBP13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 OVGP1Q12889 678 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 FOXC1Q12948 553 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 GRIK2Q13002 908 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 CST6Q15828 149 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 HS1BP3Q53T59 392 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 C6orf118Q5T5N4 469 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 DENND1BQ6P3S1 775 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 ARCQ7LC44 396 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 ERICH1Q86X53 443 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 NAXDQ8IW45 347 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 ZCCHC9Q8N567 271 aaKnown RBP13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 DEFB124Q8NES8 71 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 OR2T34Q8NGX1 318 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 FAM174AQ8TBP5 190 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 PPP1R16AQ96I34 528 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.29
SNORD88B-201ENST00000408454 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms