RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PTPN20Q4JDL3 420 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 FSCBQ5H9T9 825 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 MMS22LQ6ZRQ5 1243 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 FAM124AQ86V42 546 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 FAM71AQ8IYT1 594 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 CFAP52Q8N1V2 620 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 ZCCHC9Q8N567 271 aaKnown RBP15.91■□□□□ 0.14
TPM1-207ENST00000403994 MINDY1Q8N5J2 469 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 DEFB124Q8NES8 71 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 CADM4Q8NFZ8 388 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 OR2I1PQ8NGU4 316 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 TTC17Q96AE7 1141 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 NOX5Q96PH1 765 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 PRSS16Q9NQE7 514 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 DDIT4Q9NX09 232 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 FHOD1Q9Y613 1164 aa15.91■□□□□ 0.14
TPM1-207ENST00000403994 FOXN3O00409 490 aaPredicted RBP15.9■□□□□ 0.14
TPM1-207ENST00000403994 DAB1O75553 588 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 GRAP2O75791 330 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 ASLP04424 464 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 CEACAM1P13688 526 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 MAOBP27338 520 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 ATXN3P54252 364 aaPredicted RBP15.9■□□□□ 0.14
TPM1-207ENST00000403994 RAPGEF1Q13905 1077 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 KCNJ12Q14500 433 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 PLEKHG6Q3KR16 790 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 PITRM1Q5JRX3 1037 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 DCAF12L1Q5VU92 463 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 CIR1Q86X95 450 aaPredicted RBP15.9■□□□□ 0.14
TPM1-207ENST00000403994 DEFB106AQ8N104 65 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 DNASE2BQ8WZ79 361 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 MRGPRX3Q96LB0 322 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 PRMT1Q99873 361 aaKnown RBP15.9■□□□□ 0.14
TPM1-207ENST00000403994 NUP58Q9BVL2 599 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 PLCB1Q9NQ66 1216 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 LMBRD1Q9NUN5 540 aa15.9■□□□□ 0.14
TPM1-207ENST00000403994 CHD6Q8TD26 2715 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 SYNJ2BP-COX16A0A087WUM0 186 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 KCNU1A8MYU2 1149 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 F5H5T6 163 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 GNSP15586 552 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 KRT9P35527 623 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 RPS14P62263 151 aaKnown RBP15.89■□□□□ 0.13
TPM1-207ENST00000403994 CDK17Q00537 523 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 GRIK2Q13002 908 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 SEMA3BQ13214 749 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 HNRNPA1L2Q32P51 320 aaKnown RBP15.89■□□□□ 0.13
TPM1-207ENST00000403994 EFHC1Q5JVL4 640 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 OTUD1Q5VV17 481 aaPredicted RBP15.89■□□□□ 0.13
TPM1-207ENST00000403994 ZNF776Q68DI1 518 aaPredicted RBP15.89■□□□□ 0.13
TPM1-207ENST00000403994 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
TPM1-207ENST00000403994 SLC26A9Q7LBE3 791 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 PIP4P1Q86T03 277 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 CCDC117Q8IWD4 279 aaPredicted RBP15.89■□□□□ 0.13
TPM1-207ENST00000403994 ATP6V0D2Q8N8Y2 350 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 PCED1AQ9H1Q7 454 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 MTG2Q9H4K7 406 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 SAMSN1Q9NSI8 373 aaKnown RBP15.89■□□□□ 0.13
TPM1-207ENST00000403994 COX16Q9P0S2 106 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 CEP83Q9Y592 693 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 ZFHX4Q86UP3 3567 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 PCNX2A6NKB5 2137 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 ITIH6Q6UXX5 1313 aa15.89■□□□□ 0.13
TPM1-207ENST00000403994 PLXNA2O75051 1894 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 TMEM131Q92545 1883 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 A0A1B0GTW7 788 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 METTL12A8MUP2 240 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 UPK3BL1B0FP48 263 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 UPK3BL2E5RIL1 263 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 H0Y626 953 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 PES1O00541 588 aaKnown RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 OPHN1O60890 802 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 SYPP08247 313 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 SLC2A3P11169 496 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 EEF1GP26641 437 aaKnown RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 CCR1P32246 355 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 ACSL1P33121 698 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 CTSOP43234 321 aaPredicted RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 ST8SIA6P61647 398 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 CENPCQ03188 943 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 ZBTB16Q05516 673 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 KCNMA1Q12791 1236 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 ARID5BQ14865 1188 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 DRAP1Q14919 205 aaPredicted RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 TTC31Q49AM3 519 aaPredicted RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 TCP11X2Q5H9J9 407 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 KLHDC7AQ5VTJ3 777 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 TTC39BQ5VTQ0 682 aaPredicted RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 OR6B2Q6IFH4 312 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 HDDC3Q8N4P3 179 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 KDM1BQ8NB78 822 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 SNX19Q92543 992 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 ADAM33Q9BZ11 813 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 MIR1-1HGQ9H1L0 117 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 RSPH9Q9H1X1 276 aaPredicted RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 C6orf106Q9H6K1 298 aaPredicted RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 SYNCQ9H7C4 482 aa15.88■□□□□ 0.13
TPM1-207ENST00000403994 DNAAF2Q9NVR5 837 aaKnown RBP15.88■□□□□ 0.13
TPM1-207ENST00000403994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms