RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 FAM83EQ2M2I3 478 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 DCAF6Q58WW2 860 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 DPY19L2P1Q6NXN4 242 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 ZC3H15Q8WU90 426 aaKnown RBP14.27□□□□□ -0.12
HMGA2-204ENST00000403681 FAM136AQ96C01 138 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 PLEKHG4BQ96PX9 1271 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 APOBEC3GQ9HC16 384 aaKnown RBP14.27□□□□□ -0.12
HMGA2-204ENST00000403681 CHST12Q9NRB3 414 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 DNAJC28Q9NX36 388 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 SELENONQ9NZV5 590 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 COPG2Q9UBF2 871 aa14.27□□□□□ -0.12
HMGA2-204ENST00000403681 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 H3BSA7 217 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 SERPINB1P30740 379 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 TRPC1P48995 793 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 GPR107Q5VW38 600 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 IER5Q5VY09 327 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.13
HMGA2-204ENST00000403681 SLC51AQ86UW1 340 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 POLR1BQ9H9Y6 1135 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 ZNF839A8K0R7 811 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 CXorf49A8MYA2 514 aaPredicted RBP14.27□□□□□ -0.13
HMGA2-204ENST00000403681 CFAP99D6REC4 459 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 E5RJQ4 531 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 USP12O75317 370 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 ZBTB48P10074 688 aaPredicted RBP14.27□□□□□ -0.13
HMGA2-204ENST00000403681 TTKP33981 857 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 ZC3H12AQ5D1E8 599 aaKnown RBP14.27□□□□□ -0.13
HMGA2-204ENST00000403681 SAMD4BQ5PRF9 694 aaKnown RBP14.27□□□□□ -0.13
HMGA2-204ENST00000403681 FAR2Q96K12 515 aa14.27□□□□□ -0.13
HMGA2-204ENST00000403681 MGEA5O60502 916 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 NAB1Q13506 487 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 ADGRE1Q14246 886 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 PPM1JQ5JR12 505 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 CAMK1DQ8IU85 385 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 AHI1Q8N157 1196 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 FBXO27Q8NI29 283 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 NCLNQ969V3 563 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 PALMDQ9NP74 551 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 ITGB1BP2Q9UKP3 347 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 RNF103O00237 685 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 KPNA4O00629 521 aaPredicted RBP14.26□□□□□ -0.13
HMGA2-204ENST00000403681 TAF5Q15542 800 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 METTL21CQ5VZV1 264 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 FIZ1Q96SL8 496 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 P2RX7Q99572 595 aaKnown RBP14.26□□□□□ -0.13
HMGA2-204ENST00000403681 MAP3K20Q9NYL2 800 aaKnown RBP14.26□□□□□ -0.13
HMGA2-204ENST00000403681 TSPAN16Q9UKR8 245 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 GOLGA8TH3BQL2 631 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 ITM2AO43736 263 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 SUPT7LO94864 414 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 RGS21Q2M5E4 152 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 DHRSXQ8N5I4 330 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 ZNF555Q8NEP9 628 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 SEPT1Q8WYJ6 367 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 CERS2Q96G23 380 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 CIB1Q99828 191 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 SNX15Q9NRS6 342 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 ATAD3AQ9NVI7 634 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 NOD1Q9Y239 953 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 RAP2CQ9Y3L5 183 aa14.26□□□□□ -0.13
HMGA2-204ENST00000403681 AP3B1O00203 1094 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 PHGDHO43175 533 aaKnown RBP14.25□□□□□ -0.13
HMGA2-204ENST00000403681 VAPBO95292 243 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 ITGAXP20702 1163 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 AASDHQ4L235 1098 aaPredicted RBP14.25□□□□□ -0.13
HMGA2-204ENST00000403681 C1orf220Q5T0J3 134 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 CDHR3Q6ZTQ4 885 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 ADGRG6Q86SQ4 1221 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 TTLL6Q8N841 843 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 BORCS5Q969J3 196 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 HSPBAP1Q96EW2 488 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 NPAS2Q99743 824 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 OSBPL6Q9BZF3 934 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 ADAMTS6Q9UKP5 1117 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 SCAF8Q9UPN6 1271 aaKnown RBP14.25□□□□□ -0.13
HMGA2-204ENST00000403681 H0Y626 953 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 KCNK1O00180 336 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 ZNF862O60290 1169 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 TBC1D4O60343 1298 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 TRIM16O95361 564 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
HMGA2-204ENST00000403681 SLC4A1P02730 911 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 GRIA4P48058 902 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 NR2C2P49116 596 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 SPANXN3Q5MJ09 141 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 TMEM63BQ5T3F8 832 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 TATDN1Q6P1N9 297 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 IGDCC3Q8IVU1 814 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGA2-204ENST00000403681 PPHLN1Q8NEY8 458 aaKnown RBP14.25□□□□□ -0.13
HMGA2-204ENST00000403681 PPP1R14BQ96C90 147 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 DDX28Q9NUL7 540 aaKnown RBP14.25□□□□□ -0.13
HMGA2-204ENST00000403681 CHD4Q14839 1912 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 SPATA31A5Q5VU36 1347 aa14.25□□□□□ -0.13
HMGA2-204ENST00000403681 SPATA31A7Q8IWB4 1347 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms