RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CAPRIN1Q14444 709 aaKnown RBP11.44□□□□□ -0.58
IFT140-202ENST00000397417 TAF11Q15544 211 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 CRELD2Q6UXH1 353 aaPredicted RBP11.44□□□□□ -0.58
IFT140-202ENST00000397417 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 MAB21L3Q8N8X9 362 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 SPATA22Q8NHS9 363 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 TMEM40Q8WWA1 233 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 TMEM237Q96Q45 408 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 SDCBP2Q9H190 292 aa11.44□□□□□ -0.58
IFT140-202ENST00000397417 RPTORQ8N122 1335 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 A0A1W2PQH9 124 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 ESRRBO95718 433 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 MYL2P10916 166 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 IL1R2P27930 398 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 CD86P42081 329 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 MRPS5P82675 430 aaKnown RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 MON1BQ7L1V2 547 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 C11orf96Q7Z7L8 435 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 TRIM62Q9BVG3 475 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 PCDH18Q9HCL0 1135 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 CASS4Q9NQ75 786 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 CACNA1SQ13698 1873 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 UTRNP46939 3433 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 IQCF3P0C7M6 154 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 AXLP30530 894 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 RPA3P35244 121 aaPredicted RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 MAP2K2P36507 400 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 AFF1P51825 1210 aaKnown RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 ACLYP53396 1101 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 SMAD3P84022 425 aaKnown RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 AGBL2Q5U5Z8 902 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 TTC39BQ5VTQ0 682 aaPredicted RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 MTDHQ86UE4 582 aaKnown RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 SERPINB12Q96P63 405 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 CAB39LQ9H9S4 337 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 ETNK2Q9NVF9 386 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 SUN2Q9UH99 717 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 SMG5Q9UPR3 1016 aaKnown RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 PCDHB12Q9Y5F1 795 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 SLX4Q8IY92 1834 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 EPHB3P54753 998 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 OGDHQ02218 1023 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 PLPP4Q5VZY2 271 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 ZNF572Q7Z3I7 529 aaPredicted RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 DCUN1D1Q96GG9 259 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 AGO3Q9H9G7 860 aaKnown RBP11.43□□□□□ -0.58
IFT140-202ENST00000397417 GPAMQ9HCL2 828 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 GMIPQ9P107 970 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 SLC17A6Q9P2U8 582 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 SCN9AQ15858 1988 aa11.43□□□□□ -0.58
IFT140-202ENST00000397417 SRP72O76094 671 aaKnown RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 UBOX5O94941 541 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 MT-CYBP00156 380 aaPredicted RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 CTPS1P17812 591 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 TKTP29401 623 aaKnown RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 PGM1P36871 562 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 AQP5P55064 265 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 PITX1P78337 314 aaPredicted RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 TLE2Q04725 743 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 CERCAMQ5T4B2 595 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 N4BP2L1Q5TBK1 243 aaPredicted RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 TRIB2Q92519 343 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 P2RY11Q96G91 374 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 AURKCQ9UQB9 309 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 DNAJC16Q9Y2G8 782 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 STXBP5LQ9Y2K9 1186 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 ANXA9O76027 345 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 FBXO21O94952 628 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 GRIA1P42261 906 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 ASPAP45381 313 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 GPR15P49685 360 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 LRRC73Q5JTD7 316 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 DUPD1Q68J44 220 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 PRPF39Q86UA1 669 aaKnown RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 SLC26A11Q86WA9 606 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 FIZ1Q96SL8 496 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 PTPN18Q99952 460 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 DUSP16Q9BY84 665 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 LRRC40Q9H9A6 602 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 ANLNQ9NQW6 1124 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 SIX4Q9UIU6 781 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 BAG5Q9UL15 447 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 GRID1Q9ULK0 1009 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 C2orf71A6NGG8 1288 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 KPNA3O00505 521 aaPredicted RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 MFSD11O43934 449 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 KATNA1O75449 491 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 CBX6O95503 412 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 TFE3P19532 575 aaPredicted RBP11.42□□□□□ -0.58
IFT140-202ENST00000397417 MATKP42679 507 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 RAB27AP51159 221 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 SLC5A3P53794 718 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 GALNT3Q14435 633 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 CNGA3Q16281 694 aa11.42□□□□□ -0.58
IFT140-202ENST00000397417 DCAF12L1Q5VU92 463 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms