RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RNF38Q9H0F5 515 aa19.59■□□□□ 0.73
TSPAN4-204ENST00000397404 TRPC7Q9HCX4 862 aa19.59■□□□□ 0.73
TSPAN4-204ENST00000397404 NEU3Q9UQ49 428 aa19.59■□□□□ 0.73
TSPAN4-204ENST00000397404 NEU2Q9Y3R4 380 aa19.59■□□□□ 0.73
TSPAN4-204ENST00000397404 CHD9Q3L8U1 2897 aa19.59■□□□□ 0.73
TSPAN4-204ENST00000397404 CCDC195A0A1B0GUA6 201 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 KRT14P02533 472 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 MYL4P12829 197 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 CORO1AP31146 461 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 CHKAP35790 457 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 AVPR1AP37288 418 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 KCNJ1P48048 391 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 NRIP1P48552 1158 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 SLC7A5Q01650 507 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 HEATR6Q6AI08 1181 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 HTR3DQ70Z44 454 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 CHST9Q7L1S5 443 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 ZNF683Q8IZ20 524 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 UMODL1-AS1Q8N2C9 162 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 SNF8Q96H20 258 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 PKNOX2Q96KN3 472 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 KIF9Q9HAQ2 790 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 ARFGAP3Q9NP61 516 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 TMPRSS4Q9NRS4 437 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 PAK5Q9P286 719 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 DNMT3BQ9UBC3 853 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 MTRF1LQ9UGC7 380 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 ASIC3Q9UHC3 531 aa19.58■□□□□ 0.72
TSPAN4-204ENST00000397404 LAMA2P24043 3122 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 A0A1W2PRU2 124 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 CLDN11O75508 207 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 RFPL2O75678 378 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 TACR2P21452 398 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 YBEYP58557 167 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 VSNL1P62760 191 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 GBE1Q04446 702 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 GALNT2Q10471 571 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 TXNDC8Q6A555 127 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 TIGD7Q6NT04 549 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 FAM217AQ8IXS0 508 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 CPXM2Q8N436 756 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 EFHBQ8N7U6 833 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 ZNF557Q8N988 423 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 ZFRQ96KR1 1074 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 TSGA13Q96PP4 275 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 PPP1R2P1Q96PQ5 205 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 TMEM121Q9BTD3 319 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 CERS4Q9HA82 394 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 PIDD1Q9HB75 910 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 HAUS2Q9NVX0 235 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 CPQQ9Y646 472 aa19.57■□□□□ 0.72
TSPAN4-204ENST00000397404 E2F8A0AVK6 867 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 ETFBP38117 255 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 CDH4P55283 916 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 PPIDQ08752 370 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 NAA30Q147X3 362 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 PRKD1Q15139 912 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 PARP15Q460N3 678 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 PRSS36Q5K4E3 855 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 FBXL22Q6P050 247 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 NLRP14Q86W24 1093 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 HS6ST3Q8IZP7 471 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 CMTM8Q8IZV2 173 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 ARL14EPQ8N8R7 260 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 MAB21L3Q8N8X9 362 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 SHKBP1Q8TBC3 707 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 ZNF707Q96C28 371 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 RPRD1AQ96P16 312 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 SAE1Q9UBE0 346 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 VANGL2Q9ULK5 521 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 SH3BP1Q9Y3L3 701 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 TRANK1O15050 2925 aa19.56■□□□□ 0.72
TSPAN4-204ENST00000397404 C5orf60A6NFR6 353 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 PER2O15055 1255 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 MFSD11O43934 449 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 GCATO75600 419 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 HMBSP08397 361 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 ADCY8P40145 1251 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 GARSP41250 739 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 KCNQ1P51787 676 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 OXCT1P55809 520 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 MPP7Q5T2T1 576 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 GPR158Q5T848 1215 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 AFMIDQ63HM1 303 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 ZNF783Q6ZMS7 281 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 Q6ZNB5 142 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 RBM23Q86U06 439 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 ZC3H18Q86VM9 953 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 HOOK3Q86VS8 718 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 VN1R2Q8NFZ6 395 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 HTR3CQ8WXA8 447 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 SMG7Q92540 1137 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 OTUB2Q96DC9 234 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 FRMD8Q9BZ67 464 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 PHACTR1Q9C0D0 580 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 ZNF576Q9H609 170 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 ETNK2Q9NVF9 386 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 TRHDEQ9UKU6 1024 aa19.55■□□□□ 0.72
TSPAN4-204ENST00000397404 AGO1Q9UL18 857 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms