RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 OMDQ99983 421 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 ERVMER34-1Q9H9K5 563 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 GDF3Q9NR23 364 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 GCN1Q92616 2671 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 KCNK3O14649 394 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 ENC1O14682 589 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 SLC16A3O15427 465 aaKnown RBP18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 FBXO21O94952 628 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 MOCS3O95396 460 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 LDOC1O95751 146 aaPredicted RBP18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 CD38P28907 300 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 CD70P32970 193 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 NUDT1P36639 197 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 KRT85P78386 507 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 CST6Q15828 149 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 PKDCCQ504Y2 493 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 CACTIN-AS1Q8N1I8 211 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 SLC35F5Q8WV83 523 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 HSFY1Q96LI6 401 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 TRIM62Q9BVG3 475 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 PTPRBP23467 1997 aa18.17■□□□□ 0.5
EXOSC3-202ENST00000396521 FAM149AA5PLN7 773 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 RRP8O43159 456 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 SART1O43290 800 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 MSI1O43347 362 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 MAGEC1O60732 1142 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 RFPL3O75679 317 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 NDUFA8P51970 172 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 TBX4P57082 545 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 CDH18Q13634 790 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 CNGA2Q16280 664 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 CCDC157Q569K6 752 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 FAM133BQ5BKY9 247 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 KCNT1Q5JUK3 1230 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 TCERG1LQ5VWI1 586 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 NCEH1Q6PIU2 408 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 KRBA2Q6ZNG9 492 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 LRRC69Q6ZNQ3 347 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 ZC3H3Q8IXZ2 948 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 UBA3Q8TBC4 463 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 SAP25Q8TEE9 199 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 MYO19Q96H55 970 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 LMLNQ96KR4 655 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 SERPINB11Q96P15 392 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 TSG101Q99816 390 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 NRSN2Q9GZP1 204 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 RMND1Q9NWS8 449 aa18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 HELZ2Q9BYK8 2649 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-202ENST00000396521 EDDM13A0A1B0GTR0 161 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 A0A1W2PQ27 194 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 A0A1W2PQ64 194 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 FAM47DPA6NHR8 397 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 SIN3BO75182 1162 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 ADH1BP00325 375 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 LTFP02788 710 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 LCP1P13796 627 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 GOT1P17174 413 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 C5AR1P21730 350 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 SLC8A1P32418 973 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 NNMTP40261 264 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 CSKP41240 450 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 OVGP1Q12889 678 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 NUMA1Q14980 2115 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 RNF219Q5W0B1 726 aaPredicted RBP18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 RFWD3Q6PCD5 774 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 SND1Q7KZF4 910 aaKnown RBP eCLIP18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 BAP1Q92560 729 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 CNDP2Q96KP4 475 aaKnown RBP18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 SLC6A18Q96N87 628 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 BBC3Q96PG8 261 aaPredicted RBP18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 NEUROG2Q9H2A3 272 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 KDM4CQ9H3R0 1056 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 AASDHPPTQ9NRN7 309 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 TLR6Q9Y2C9 796 aa18.15■□□□□ 0.5
EXOSC3-202ENST00000396521 C10orf142B7Z368 130 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 RNASEH2AO75792 299 aaKnown RBP18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 RXRGP48443 463 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 SGSHP51688 502 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 ECT2LQ008S8 904 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 C19orf57Q0VDD7 668 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 SLC12A1Q13621 1099 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 RTP5Q14D33 572 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 CBWD6Q4V339 395 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 COBLL1Q53SF7 1204 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 CBWD3Q5JTY5 395 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 CBWD5Q5RIA9 395 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 C9orf64Q5T6V5 341 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 LAYNQ6UX15 382 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 BEND5Q7L4P6 421 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 IQCHQ86VS3 1027 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 WFDC5Q8TCV5 224 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 EEF2KMTQ96G04 330 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 PPP1R9BQ96SB3 815 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 SCAND2PQ9GZW5 306 aaPredicted RBP18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 STIM2Q9P246 746 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 ARMCX3Q9UH62 379 aaPredicted RBP18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
EXOSC3-202ENST00000396521 ITIH6Q6UXX5 1313 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms