RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 KCNK1O00180 336 aa15.36■□□□□ 0.05
CBX3-202ENST00000396386 SYN3O14994 580 aa15.36■□□□□ 0.05
CBX3-202ENST00000396386 SNRPAP09012 282 aaKnown RBP15.36■□□□□ 0.05
CBX3-202ENST00000396386 SF3A3Q12874 501 aaKnown RBP eCLIP15.36■□□□□ 0.05
CBX3-202ENST00000396386 LACTB2Q53H82 288 aaPredicted RBP15.36■□□□□ 0.05
CBX3-202ENST00000396386 LGSNQ5TDP6 509 aa15.36■□□□□ 0.05
CBX3-202ENST00000396386 PID1Q7Z2X4 250 aa15.36■□□□□ 0.05
CBX3-202ENST00000396386 APBB2Q92870 758 aa15.36■□□□□ 0.05
CBX3-202ENST00000396386 KLF6Q99612 283 aaPredicted RBP15.36■□□□□ 0.05
CBX3-202ENST00000396386 DNAJB4Q9UDY4 337 aa15.36■□□□□ 0.05
CBX3-202ENST00000396386 GRID1Q9ULK0 1009 aa15.36■□□□□ 0.05
CBX3-202ENST00000396386 MYO18AQ92614 2054 aaKnown RBP15.36■□□□□ 0.05
CBX3-202ENST00000396386 SDR42E2A6NKP2 422 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 CXorf49A8MYA2 514 aaPredicted RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 TRIM49D1C9J1S8 452 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 LPXNO60711 386 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 TADA2AO75478 443 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 CSH1P0DML2 217 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 CSH2P0DML3 217 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 PGAM1P18669 254 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 GRK4P32298 578 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 HTR7P34969 479 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 GARSP41250 739 aaKnown RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 COG7P83436 770 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 SLC18A2Q05940 514 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 BFSP2Q13515 415 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 EIF4EBP2Q13542 120 aaPredicted RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 ITPRIPL1Q6GPH6 555 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 CASC4Q6P4E1 433 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 FAM47EQ6ZV65 393 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 CCNJLQ8IV13 435 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 ABI1Q8IZP0 508 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 TNS4Q8IZW8 715 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 TCP10LQ8TDR4 215 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 DEPDC1BQ8WUY9 529 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 SERAC1Q96JX3 654 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 HAPLN3Q96S86 360 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 NAT9Q9BTE0 207 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 GBA3Q9H227 469 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 ELAC1Q9H777 363 aaKnown RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 SMYD2Q9NRG4 433 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 ARL2BPQ9Y2Y0 163 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 WDR27A2RRH5 827 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 FAM155BO75949 473 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 KRT38O76015 456 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 ADRA1DP25100 572 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 CCR1P32246 355 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 SERPINB9P50453 376 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 NEK3P51956 506 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 PRMT2P55345 433 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 SESN2P58004 480 aaPredicted RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 DNAJC3Q13217 504 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 ARHGEF6Q15052 776 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 VARS2Q5ST30 1063 aaKnown RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 CGB2Q6NT52 195 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 TRMT10BQ6PF06 316 aaKnown RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 TRPM8Q7Z2W7 1104 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 SCD5Q86SK9 330 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 MICALL1Q8N3F8 863 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 MTBPQ96DY7 904 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 VAT1Q99536 393 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 TRIM56Q9BRZ2 755 aaKnown RBP15.35■□□□□ 0.05
CBX3-202ENST00000396386 SEZ6LQ9BYH1 1024 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 PITPNM3Q9BZ71 974 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 TRHDEQ9UKU6 1024 aa15.35■□□□□ 0.05
CBX3-202ENST00000396386 FGF10O15520 208 aaPredicted RBP15.34■□□□□ 0.05
CBX3-202ENST00000396386 PYGBP11216 843 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 MGAT1P26572 445 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 ACTN3Q08043 901 aaPredicted RBP15.34■□□□□ 0.05
CBX3-202ENST00000396386 PPP2R5DQ14738 602 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 CYS1Q717R9 158 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 CASP10Q92851 521 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 C8orf48Q96LL4 319 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 SERPINB11Q96P15 392 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.34■□□□□ 0.053e-6■■□□□ 14.4
CBX3-202ENST00000396386 TMEM51Q9NW97 253 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 SLC17A7Q9P2U7 560 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 NEU3Q9UQ49 428 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 STARD13Q9Y3M8 1113 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 PCDHB5Q9Y5E4 795 aa15.34■□□□□ 0.05
CBX3-202ENST00000396386 A0A1W2PQH9 124 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 ERI2A8K979 691 aaKnown RBP15.33■□□□□ 0.05
CBX3-202ENST00000396386 MSI1O43347 362 aaKnown RBP15.33■□□□□ 0.05
CBX3-202ENST00000396386 NBNO60934 754 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 FKTNO75072 461 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 AP2A1O95782 977 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 HOXC13P31276 330 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 CCNFP41002 786 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 MAGEA11P43364 429 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 ZNF33AQ06730 810 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 NAB1Q13506 487 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 CTXN3Q4LDR2 81 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 ZNF280DQ6N043 979 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 RWDD4Q6NW29 188 aaKnown RBP15.33■□□□□ 0.05
CBX3-202ENST00000396386 MARK2Q7KZI7 788 aaKnown RBP15.33■□□□□ 0.05
CBX3-202ENST00000396386 SPOCK2Q92563 424 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 TBC1D31Q96DN5 1066 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 IQCGQ9H095 443 aaKnown RBP15.33■□□□□ 0.05
CBX3-202ENST00000396386 SIK2Q9H0K1 926 aa15.33■□□□□ 0.05
CBX3-202ENST00000396386 SYBUQ9NX95 663 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms