RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SETD3Q86TU7 594 aaPredicted RBP6.72□□□□□ -1.33
BDNF-203ENST00000395978 MIB1Q86YT6 1006 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 ATP6V0D2Q8N8Y2 350 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 PCSK9Q8NBP7 692 aaKnown RBP6.72□□□□□ -1.33
BDNF-203ENST00000395978 AGAP11Q8TF27 550 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 SGF29Q96ES7 293 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 CERS2Q96G23 380 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 RMDN2Q96LZ7 410 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 RPRD1AQ96P16 312 aaPredicted RBP6.72□□□□□ -1.33
BDNF-203ENST00000395978 HERPUD2Q9BSE4 406 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 FICDQ9BVA6 458 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 CXorf56Q9H5V9 222 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 XPNPEP3Q9NQH7 507 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 ARHGAP26Q9UNA1 814 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 ST3GAL5Q9UNP4 418 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 PTCH2Q9Y6C5 1203 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 ATP5BP06576 529 aaKnown RBP6.72□□□□□ -1.33
BDNF-203ENST00000395978 KRT16P08779 473 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 MLNP12872 115 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 CYP2C18P33260 490 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 SLC18A1P54219 525 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 LILRA4P59901 499 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 CCDC15Q0P6D6 951 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 POU6F1Q14863 301 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 ZNF467Q7Z7K2 595 aaPredicted RBP6.72□□□□□ -1.33
BDNF-203ENST00000395978 KCNMB4Q86W47 210 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 TTC30AQ86WT1 665 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 MYLK4Q86YV6 388 aaPredicted RBP6.72□□□□□ -1.33
BDNF-203ENST00000395978 SEPT5Q99719 369 aaPredicted RBP6.72□□□□□ -1.33
BDNF-203ENST00000395978 DPEP3Q9H4B8 488 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 MRGBPQ9NV56 204 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 PGAP2Q9UHJ9 254 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 CDYLQ9Y232 598 aa6.72□□□□□ -1.33
BDNF-203ENST00000395978 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 GCATO75600 419 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 MYCP01106 439 aaPredicted RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 ENO3P13929 434 aaPredicted RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 RPL9P32969 192 aaKnown RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 GLRBP48167 497 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 TUBP50607 506 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 INCA1Q0VD86 236 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 FOXD4Q12950 439 aaPredicted RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 RIPK1Q13546 671 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 SOWAHAQ2M3V2 549 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 PDPK2PQ6A1A2 396 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 SCARA3Q6AZY7 606 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 ARCQ7LC44 396 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 FAM35AQ86V20 835 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 ST13P4Q8IZP2 240 aaPredicted RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 PIWIL2Q8TC59 973 aaKnown RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 RAET1EQ8TD07 263 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 ZNF512Q96ME7 567 aaPredicted RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 ZFP42Q96MM3 310 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 HNRNPABQ99729 332 aaKnown RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 ADAM2Q99965 735 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 SIKE1Q9BRV8 207 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 SYT17Q9BSW7 474 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 IL22Q9GZX6 179 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 C12orf65Q9H3J6 166 aaKnown RBP6.71□□□□□ -1.33
BDNF-203ENST00000395978 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 CHST12Q9NRB3 414 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 C15orf41Q9Y2V0 281 aa6.71□□□□□ -1.33
BDNF-203ENST00000395978 DPYSL4O14531 572 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 TPP1O14773 563 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 VAPBO95292 243 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 THRAP10827 490 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 GFAPP14136 432 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 CYP3A5P20815 502 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 LMO2P25791 158 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 ETFBP38117 255 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 NRLP54845 237 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 CA9Q16790 459 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 PREPLQ4J6C6 727 aaPredicted RBP6.71□□□□□ -1.34
BDNF-203ENST00000395978 SWT1Q5T5J6 900 aaKnown RBP6.71□□□□□ -1.34
BDNF-203ENST00000395978 AGAP9Q5VTM2 703 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 CRYBG2Q8N1P7 616 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 NETO2Q8NC67 525 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 NDRG1Q92597 394 aaKnown RBP6.71□□□□□ -1.34
BDNF-203ENST00000395978 USP6NLQ92738 828 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 SPDL1Q96EA4 605 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 ANKRD27Q96NW4 1050 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 QKIQ96PU8 341 aaKnown RBP eCLIP6.71□□□□□ -1.34
BDNF-203ENST00000395978 KCTD15Q96SI1 283 aaPredicted RBP6.71□□□□□ -1.34
BDNF-203ENST00000395978 RNPEPL1Q9HAU8 725 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 SUN2Q9UH99 717 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 ZNF180Q9UJW8 692 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 PLLPQ9Y342 182 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 TCRBV7S3A2A0A539 114 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 F8W8V4 182 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 SLCO1B7G3V0H7 640 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 BIRC5O15392 142 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 SNX2O60749 519 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 RASSF9O75901 435 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 FAM155BO75949 473 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 DDHD2O94830 711 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 PGK1P00558 417 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 ITGA2BP08514 1039 aa6.71□□□□□ -1.34
BDNF-203ENST00000395978 AVPR1AP37288 418 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms