RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ATP6V1E2Q96A05 226 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SHISA4Q96DD7 197 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF180Q9UJW8 692 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SOX13Q9UN79 622 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PARP14Q460N5 1801 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TRPC5OSA6NMA1 111 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 NEMP1O14524 444 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 STX7O15400 261 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 AKAP5P24588 427 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 OCRLQ01968 901 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PEX6Q13608 980 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SLC12A1Q13621 1099 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 IL31Q6EBC2 164 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PSRC1Q6PGN9 363 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RFX8Q6ZV50 586 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 FAM35AQ86V20 835 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 GPIHBP1Q8IV16 184 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF461Q8TAF7 563 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 C9orf72Q96LT7 481 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM39AQ9NV64 488 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ADGRA2Q96PE1 1338 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DFFAO00273 331 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PQBP1O60828 265 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RNASEH1O60930 286 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DAB1O75553 588 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SKOR1P84550 965 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MDH1BQ5I0G3 518 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SLC35F5Q8WV83 523 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SUSD3Q96L08 255 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TKTL2Q9H0I9 626 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 KLK14Q9P0G3 267 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 WRAP73Q9P2S5 460 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 POLIQ9UNA4 740 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ANKRD6Q9Y2G4 727 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 REXO2Q9Y3B8 237 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 A0A1B0GVM2 712 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM247A6NEH6 219 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TCAF2A6NFQ2 919 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ARL5CA6NH57 179 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 LIASO43766 372 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PGK1P00558 417 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MAPKAPK2P49137 400 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ARFIP2P53365 341 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PDE12Q6L8Q7 609 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TTC16Q8NEE8 873 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SKA2Q8WVK7 121 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ATXN2LQ8WWM7 1075 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PNKPQ96T60 521 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TRIM15Q9C019 465 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ARVCFO00192 962 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 GRAP2O75791 330 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SNAI1O95863 264 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PGAM1P18669 254 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 FGFR4P22455 802 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ADRA1DP25100 572 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ADSLP30566 484 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RPL22P35268 128 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CDKN2BP42772 138 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MAGEA11P43364 429 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TTPAP49638 278 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 NDST2P52849 883 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 BIRC2Q13490 618 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SHROOM1Q2M3G4 852 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 EEF1DP3Q658K8 133 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SPATA21Q7Z572 469 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MGARPQ8TDB4 240 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 C1orf74Q96LT6 269 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 KCNK16Q96T55 309 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CPNE1Q99829 537 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MUC3BQ9H195 1237 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 XYLT2Q9H1B5 865 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TNPO3Q9Y5L0 923 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DOCK6Q96HP0 2047 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SOBPA7XYQ1 873 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SOAT2O75908 522 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 GFAPP14136 432 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGDIAP52565 204 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF132P52740 706 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PPIGQ13427 754 aaKnown RBP eCLIP3.47□□□□□ -1.859e-7■■□□□ 14.5
VPS13C-203ENST00000395896 NPAS4Q8IUM7 802 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TBC1D19Q8N5T2 526 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 EMC1Q8N766 993 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CCDC124Q96CT7 223 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 BTBD6Q96KE9 485 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 NUF2Q9BZD4 464 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SMYD3Q9H7B4 428 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RBM22Q9NW64 420 aaKnown RBP eCLIP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 FAM153AQ9UHL3 310 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ACACBO00763 2458 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MMP13P45452 471 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PEX5P50542 639 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 APLP1P51693 650 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PPP1R26Q5T8A7 1209 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MIB1Q86YT6 1006 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RDH11Q8TC12 318 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SPOCK2Q92563 424 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 HDAC11Q96DB2 347 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SCYL1Q96KG9 808 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TOX2Q96NM4 488 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms