RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 ANLNQ9NQW6 1124 aa13.81□□□□□ -0.2
HLA-DMA-202ENST00000395303 ABCB8Q9NUT2 735 aa13.81□□□□□ -0.2
HLA-DMA-202ENST00000395303 GGA2Q9UJY4 613 aa13.81□□□□□ -0.2
HLA-DMA-202ENST00000395303 CAPN11Q9UMQ6 739 aa13.81□□□□□ -0.2
HLA-DMA-202ENST00000395303 PAXBP1Q9Y5B6 917 aa13.81□□□□□ -0.2
HLA-DMA-202ENST00000395303 CACNA1BQ00975 2339 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 SYNJ2BP-COX16A0A087WUM0 186 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 SIGLEC16A6NMB1 481 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 PAGE1O75459 146 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 ALDH1A2O94788 518 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 ZBED6P86452 979 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 DEUP1Q05D60 604 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 LMAN2Q12907 356 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 SRSF5Q13243 272 aaKnown RBP13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 AUHQ13825 339 aaKnown RBP13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 ZNF234Q14588 700 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 LAIR1Q6GTX8 287 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 SDE2Q6IQ49 451 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 FBXL22Q6P050 247 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 STRADAQ7RTN6 431 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 MFN1Q8IWA4 741 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 CHPFQ8IZ52 775 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 EMC1Q8N766 993 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 JOSD2Q8TAC2 188 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 RXFP2Q8WXD0 754 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 RNF34Q969K3 372 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 ZC3H10Q96K80 434 aaKnown RBP13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 C1orf74Q96LT6 269 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 XPO4Q9C0E2 1151 aaKnown RBP13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 TKTL2Q9H0I9 626 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 TAS2R14Q9NYV8 317 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 COX16Q9P0S2 106 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 STIM2Q9P246 746 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 INTS6Q9UL03 887 aaKnown RBP13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 HS3ST4Q9Y661 456 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 STON1Q9Y6Q2 735 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 CHD8Q9HCK8 2581 aa13.8□□□□□ -0.2
HLA-DMA-202ENST00000395303 IGLV3-10A0A075B6K4 115 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 A0A1B0GVM2 712 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 FAM170AA1A519 330 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 TCAF2A6NFQ2 919 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 RPP40O75818 363 aaKnown RBP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 GYPCP04921 128 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 KRT3P12035 628 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 PDGFRAP16234 1089 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 GABRG2P18507 467 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 CD70P32970 193 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 IL12RB1P42701 662 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 WASP42768 502 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 PLK1P53350 603 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 ATXN1P54253 815 aaKnown RBP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 KLHL30Q0D2K2 578 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 SIM2Q14190 667 aaPredicted RBP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 PTPRNQ16849 979 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 CCDC14Q49A88 953 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 FSCBQ5H9T9 825 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 RABGAP1LQ5R372 815 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 HGSNATQ68CP4 663 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 MBLAC2Q68D91 279 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 KIAA1211LQ6NV74 962 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 SND1Q7KZF4 910 aaKnown RBP eCLIP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 CCAR2Q8N163 923 aaKnown RBP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 CFAP52Q8N1V2 620 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 HAPLN3Q96S86 360 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 SELENOOQ9BVL4 669 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 SEPT11Q9NVA2 429 aaKnown RBP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 CACNA2D2Q9NY47 1150 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 BZW2Q9Y6E2 419 aaKnown RBP13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 CACNA1EQ15878 2313 aa13.79□□□□□ -0.2
HLA-DMA-202ENST00000395303 TCRBV21S2A2A0A5A6 115 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 DRGXA6NNA5 263 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 WASH3PC4AMC7 463 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 DDX3XO00571 662 aaKnown RBP eCLIP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 CBFA2T2O43439 604 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 GJB6O95452 261 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 TPM3P06753 285 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 DLDP09622 509 aaKnown RBP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 SDC4P31431 198 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 LMNB2Q03252 620 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 SLC12A1Q13621 1099 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 CDH18Q13634 790 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 FUT11Q495W5 492 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 USP39Q53GS9 565 aaKnown RBP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 PLEKHA7Q6IQ23 1121 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 ANO7Q6IWH7 933 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 CXorf57Q6NSI4 855 aaKnown RBP13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 C14orf80Q86SX3 495 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 C11orf74Q86VG3 221 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 CARNMT1Q8N4J0 409 aa13.78□□□□□ -0.2
HLA-DMA-202ENST00000395303 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms