RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PLK4O00444 970 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 MID1O15344 667 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 IRAK2O43187 625 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 GABBR2O75899 941 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 IGLV3-27P01718 113 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 CSKP41240 450 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 TBX4P57082 545 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 LRMPQ12912 555 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 PKDCCQ504Y2 493 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 TMPRSS12Q86WS5 348 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 ZNF557Q8N988 423 aaPredicted RBP21.93■■□□□ 1.1
TRAF4-203ENST00000394925 FIBINQ8TAL6 211 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 ELF4Q99607 663 aaPredicted RBP21.93■■□□□ 1.1
TRAF4-203ENST00000394925 IRX2Q9BZI1 471 aaPredicted RBP21.93■■□□□ 1.1
TRAF4-203ENST00000394925 NEUROG2Q9H2A3 272 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 EBF2Q9HAK2 575 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 INTS6Q9UL03 887 aaKnown RBP21.93■■□□□ 1.1
TRAF4-203ENST00000394925 COQ4Q9Y3A0 265 aa21.93■■□□□ 1.1
TRAF4-203ENST00000394925 CBX4O00257 560 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 ENC1O14682 589 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 WNT1P04628 370 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 CLDN6P56747 220 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 KRT85P78386 507 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 CST6Q15828 149 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 HNRNPA1L2Q32P51 320 aaKnown RBP21.92■■□□□ 1.1
TRAF4-203ENST00000394925 NADSYN1Q6IA69 706 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 PMF1Q6P1K2 205 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 CARNMT1Q8N4J0 409 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 HJURPQ8NCD3 748 aaPredicted RBP21.92■■□□□ 1.1
TRAF4-203ENST00000394925 SKA1Q96BD8 255 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 MYEOVQ96EZ4 313 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 MRGPRX3Q96LB0 322 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 PRICKLE1Q96MT3 831 aaPredicted RBP21.92■■□□□ 1.1
TRAF4-203ENST00000394925 OMDQ99983 421 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 AASDHPPTQ9NRN7 309 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 KIAA1257Q9ULG3 409 aa21.92■■□□□ 1.1
TRAF4-203ENST00000394925 SHROOM3Q8TF72 1996 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 HELZ2Q9BYK8 2649 aaKnown RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 LRRC72A6NJI9 287 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 E9PAM4 449 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 RNASEH2AO75792 299 aaKnown RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 LDOC1O95751 146 aaPredicted RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 LTFP02788 710 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 ASLP04424 464 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 ITGAVP06756 1048 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 ABCB4P21439 1286 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 RPS24P62847 133 aaKnown RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 SFSWAPQ12872 951 aaKnown RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 C9orf64Q5T6V5 341 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 LCLAT1Q6UWP7 414 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 MMAAQ8IVH4 418 aaKnown RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 UBR7Q8N806 425 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 CLEC4CQ8WTT0 213 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 SLC35F5Q8WV83 523 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 IRGQQ8WZA9 623 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 TFAP2BQ92481 460 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 CNDP2Q96KP4 475 aaKnown RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 GOLPH3LQ9H4A5 285 aa21.91■■□□□ 1.1
TRAF4-203ENST00000394925 COL5A1P20908 1838 aaPredicted RBP21.91■■□□□ 1.1
TRAF4-203ENST00000394925 TYW5A2RUC4 315 aaKnown RBP21.9■■□□□ 1.1
TRAF4-203ENST00000394925 ZNF202O95125 648 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 JUPP14923 745 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 CD38P28907 300 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 SLC8A1P32418 973 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 CTSOP43234 321 aaPredicted RBP21.9■■□□□ 1.1
TRAF4-203ENST00000394925 ABCG1P45844 678 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 DNAJC3Q13217 504 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 KCNJ12Q14500 433 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 SHBQ15464 509 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 TMEM270Q6UE05 265 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 MMS22LQ6ZRQ5 1243 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 OR2T34Q8NGX1 318 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 PIP4K2CQ8TBX8 421 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 AZIN2Q96A70 460 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 DDX50Q9BQ39 737 aaKnown RBP21.9■■□□□ 1.1
TRAF4-203ENST00000394925 ERVW-1Q9UQF0 538 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 PCDHGA1Q9Y5H4 931 aa21.9■■□□□ 1.1
TRAF4-203ENST00000394925 TTC34A8MYJ7 566 aa21.89■■□□□ 1.09
TRAF4-203ENST00000394925 WNT9AO14904 365 aa21.89■■□□□ 1.09
TRAF4-203ENST00000394925 TBXAS1P24557 533 aaPredicted RBP21.89■■□□□ 1.09
TRAF4-203ENST00000394925 CDH18Q13634 790 aa21.89■■□□□ 1.09
TRAF4-203ENST00000394925 FSCBQ5H9T9 825 aa21.89■■□□□ 1.09
TRAF4-203ENST00000394925 CCDC117Q8IWD4 279 aaPredicted RBP21.89■■□□□ 1.09
TRAF4-203ENST00000394925 CFAP52Q8N1V2 620 aa21.89■■□□□ 1.09
TRAF4-203ENST00000394925 EID2Q8N6I1 236 aa21.89■■□□□ 1.09
TRAF4-203ENST00000394925 NXPE2Q96DL1 559 aa21.89■■□□□ 1.09
TRAF4-203ENST00000394925 FCRL2Q96LA5 508 aaPredicted RBP21.89■■□□□ 1.09
TRAF4-203ENST00000394925 NUCKS1Q9H1E3 243 aaKnown RBP21.89■■□□□ 1.09
TRAF4-203ENST00000394925 SETXQ7Z333 2677 aaKnown RBP21.89■■□□□ 1.09
TRAF4-203ENST00000394925 M0QYV0 167 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 SLC16A3O15427 465 aaKnown RBP21.88■■□□□ 1.09
TRAF4-203ENST00000394925 RFPL3O75679 317 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 PAEPP09466 180 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 HNF1BP35680 557 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 PRCPP42785 496 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 PSMD8P48556 350 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 PITRM1Q5JRX3 1037 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 C6orf118Q5T5N4 469 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 KDM1BQ8NB78 822 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 SAP25Q8TEE9 199 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms