RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 PDHXO00330 501 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DYNC1LI2O43237 492 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 TSPAN1O60635 241 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ITGAVP06756 1048 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SRGAP2BP0DMP2 458 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 HOXD12P35452 270 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 FDFT1P37268 417 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 PTK7Q13308 1070 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ITGA9Q13797 1035 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 MORF4L2Q15014 288 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DNAL1Q4LDG9 190 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 TAPT1Q6NXT6 567 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 CATSPER4Q7RTX7 472 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 PATL1Q86TB9 770 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SLC15A3Q8IY34 581 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 FNDC8Q8TC99 324 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 FAF2Q96CS3 445 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DCUN1D1Q96GG9 259 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SRPK1Q96SB4 655 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 BCO2Q9BYV7 579 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SENP6Q9GZR1 1112 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 BRD8Q9H0E9 1235 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 NXF3Q9H4D5 531 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 MAGED2Q9UNF1 606 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 MFHAS1Q9Y4C4 1052 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 IKBKGQ9Y6K9 419 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 CXCL11O14625 94 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ADCY6O43306 1168 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 IL18RAPO95256 599 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 APRTP07741 180 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 YBX3P16989 372 aaKnown RBP eCLIP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 GPD1P21695 349 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 IGFBP6P24592 240 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 EPHX2P34913 555 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 CD97P48960 835 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ENPEPQ07075 957 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DPYSL3Q14195 570 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 GRIK4Q16099 956 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 MAP7D1Q3KQU3 841 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 LRRC38Q5VT99 294 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 TMEM53Q6P2H8 277 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 TMEM110Q86TL2 294 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 PPIL6Q8IXY8 311 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 GPRC5AQ8NFJ5 357 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 GRIN3AQ8TCU5 1115 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 PPP4R1Q8TF05 950 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DIS3LQ8TF46 1054 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 NKD2Q969F2 451 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 NT5C1AQ9BXI3 368 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 LSM1O15116 133 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ALOX15BO15296 676 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 F7P08709 466 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SMPD1P17405 629 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 LMO2P25791 158 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 RBL1P28749 1068 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ALDH1A3P47895 512 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 MYBPC1Q00872 1141 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ROR1Q01973 937 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 GSTM4Q03013 218 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ITPRIPL1Q6GPH6 555 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 BBS12Q6ZW61 710 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 TTC30AQ86WT1 665 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DEFB107AQ8IZN7 70 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 PDIK1LQ8N165 341 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SMYD1Q8NB12 490 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 C20orf27Q9GZN8 174 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DHX35Q9H5Z1 703 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 GPAMQ9HCL2 828 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 ASNSD1Q9NWL6 643 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 NDUFA13Q9P0J0 144 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SPATA7Q9P0W8 599 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 SLC24A2Q9UI40 661 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 DMTF1Q9Y222 760 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 WDR37Q9Y2I8 494 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 RBMX2Q9Y388 322 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 NME7Q9Y5B8 376 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 MAD1L1Q9Y6D9 718 aa10.23□□□□□ -0.77
PSEN1-204ENST00000394164 WDR90Q96KV7 1748 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 KBTBD13C9JR72 458 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 TMX2-CTNND1H3BSU7 103 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 TM9SF1O15321 606 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 LYPLA1O75608 230 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-204ENST00000394164 CRTAMO95727 393 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 ACAT1P24752 427 aaKnown RBP10.22□□□□□ -0.77
PSEN1-204ENST00000394164 STIP1P31948 543 aaKnown RBP10.22□□□□□ -0.77
PSEN1-204ENST00000394164 CDH5P33151 784 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-204ENST00000394164 SLC18A1P54219 525 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 RBP5P82980 135 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 TAP1Q03518 808 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 GRM1Q13255 1194 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 BMPR2Q13873 1038 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 CCDC14Q49A88 953 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 HSP90AA5PQ58FG0 334 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 EFHC2Q5JST6 749 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 FASTKD5Q7L8L6 764 aaKnown RBP10.22□□□□□ -0.77
PSEN1-204ENST00000394164 PYROXD2Q8N2H3 581 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 RNF148Q8N7C7 305 aa10.22□□□□□ -0.77
PSEN1-204ENST00000394164 CXorf38Q8TB03 319 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms