RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 C10orf142B7Z368 130 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 RNASEH1O60930 286 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 GNA14O95837 355 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 SRPRAP08240 638 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 BRD2P25440 801 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 GPD2P43304 727 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 MARSP56192 900 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 CCDC40Q4G0X9 1142 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 MS4A13Q5J8X5 152 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 SMYD5Q6GMV2 418 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 NADSYN1Q6IA69 706 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 TMPRSS7Q7RTY8 843 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 CCDC117Q8IWD4 279 aaPredicted RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 ZNF366Q8N895 744 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 PNPLA1Q8N8W4 532 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 DQX1Q8TE96 717 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 RHBDD1Q8TEB9 315 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 SNX19Q92543 992 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 PRICKLE1Q96MT3 831 aaPredicted RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 ORAI3Q9BRQ5 295 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 PABPC3Q9H361 631 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 SNX11Q9Y5W9 270 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 CACNA1GO43497 2377 aa18.14■□□□□ 0.49
SNRPA1-202ENST00000394082 GOLGA6L7A0A1B0GV03 622 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 BICDL2A1A5D9 508 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 GRK6P43250 576 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 RACK1P63244 317 aaKnown RBP18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 TRIM59Q8IWR1 403 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 EHBP1Q8NDI1 1231 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 CLEC4CQ8WTT0 213 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 KAT5Q92993 513 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 MRGPRX3Q96LB0 322 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 ADAMTS1Q9UHI8 967 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 INTS6Q9UL03 887 aaKnown RBP18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 FZD4Q9ULV1 537 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 SLCO1B1Q9Y6L6 691 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 ITIH6Q6UXX5 1313 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 PLXNB3Q9ULL4 1909 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 CABIN1Q9Y6J0 2220 aa18.13■□□□□ 0.49
SNRPA1-202ENST00000394082 KNL1Q8NG31 2342 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 PTPRBP23467 1997 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 VILLO15195 856 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 TNFSF14O43557 240 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 IGHV4-34P06331 123 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 CD44P16070 742 aaKnown RBP18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 CSKP41240 450 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 CTSKP43235 329 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 CCT8P50990 548 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 RPS24P62847 133 aaKnown RBP18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 NUCB2P80303 420 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 CDH18Q13634 790 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 KIAA0895LQ68EN5 471 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 SCUBE3Q8IX30 993 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 GALNT15Q8N3T1 639 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 ERCC4Q92889 916 aaPredicted RBP18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 SLC4A5Q9BY07 1137 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 CCDC86Q9H6F5 360 aaKnown RBP18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 FBXL12Q9NXK8 326 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 MAN1B1Q9UKM7 699 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 LHX6Q9UPM6 363 aa18.12■□□□□ 0.49
SNRPA1-202ENST00000394082 A0A1W2PPC4 97 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 PIK3R2O00459 728 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 SIN3BO75182 1162 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 FSBPO95073 299 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 LUC7L3O95232 432 aaKnown RBP18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 MOCS3O95396 460 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 IGLV3-25P01717 112 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 KCNH2Q12809 1159 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 EIF4EBP2Q13542 120 aaPredicted RBP18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 SLC12A1Q13621 1099 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 CST6Q15828 149 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 INAVAQ3KP66 663 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 C9orf64Q5T6V5 341 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 RRAGAQ7L523 313 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 ENOSF1Q7L5Y1 443 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 TMEM110Q86TL2 294 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 SKA1Q96BD8 255 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 BTN2A3PQ96KV6 586 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 KREMEN1Q96MU8 473 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 MED15Q96RN5 788 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 MIS12Q9H081 205 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 NUCKS1Q9H1E3 243 aaKnown RBP18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 STIM2Q9P246 746 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 NAALADL1Q9UQQ1 740 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 GPSM3Q9Y4H4 160 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 ATRXP46100 2492 aa18.11■□□□□ 0.49
SNRPA1-202ENST00000394082 EDDM13A0A1B0GTR0 161 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 LRRC72A6NJI9 287 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 PPP1R3GB7ZBB8 358 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 MED7O43513 233 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 ATXN1LP0C7T5 689 aaKnown RBP18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 GALCP54803 685 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 ECT2LQ008S8 904 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 DCAF6Q58WW2 860 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 FSCBQ5H9T9 825 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 PITRM1Q5JRX3 1037 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 ARHGEF19Q8IW93 802 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 CARNMT1Q8N4J0 409 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 OR2T34Q8NGX1 318 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms