RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DDX4Q9NQI0 724 aaKnown RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 TRPM5Q9NZQ8 1165 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 GAKO14976 1311 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 RAMP2O60895 175 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 CYP1A2P05177 515 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ABHD2P08910 425 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 RPL14P50914 215 aaKnown RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 CAMK2GQ13555 558 aaPredicted RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 FRG1Q14331 258 aaKnown RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 NECAB2Q7Z6G3 386 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 EXOC3L1Q86VI1 746 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 FAM71AQ8IYT1 594 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 UTP15Q8TED0 518 aaKnown RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 RORBQ92753 470 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ZFP42Q96MM3 310 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ATXN3LQ9H3M9 355 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 KCNMB3Q9NPA1 279 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ETNK2Q9NVF9 386 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 MAP3K13O43283 966 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ATG7O95352 703 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 MARCKSL1P49006 195 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 NAGLUP54802 743 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ANGPT1Q15389 498 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ZNF284Q2VY69 593 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 CYP4Z1Q86W10 505 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 TMEM51Q9NW97 253 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 COL3A1P02461 1466 aaPredicted RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 NCANO14594 1321 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 A0A0B4J269 797 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 CHADO15335 359 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 GSTM1P09488 218 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 MBL2P11226 248 aaPredicted RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 YBX3P16989 372 aaKnown RBP eCLIP13.39□□□□□ -0.27
LCA5-202ENST00000392959 MAD2L1Q13257 205 aaPredicted RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 TMEM26Q6ZUK4 368 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 ART4Q93070 314 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 DAPK2Q9UIK4 370 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 PDZK1P1A8MUH7 402 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 H7C4K7 107 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 LIASO43766 372 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CCNT2O60583 730 aaKnown RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 ENTPD5O75356 428 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 MYL4P12829 197 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 TCF3P15923 654 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 PTDSS1P48651 473 aaKnown RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 ARMC4Q5T2S8 1044 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 TFAP2DQ7Z6R9 452 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 IQCKQ8N0W5 287 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SPPL2AQ8TCT8 520 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SLC2A14Q8TDB8 520 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SHC3Q92529 594 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 MRPS31Q92665 395 aaKnown RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 TECPR2O15040 1411 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 ASTN2O75129 1339 aaPredicted RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 SIGLEC16A6NMB1 481 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 LACTBL1A8MY62 500 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 HOXB8P17481 243 aaPredicted RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 BST1Q10588 318 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 PARP6Q2NL67 630 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 ERAP2Q6P179 960 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 HDDC2Q7Z4H3 204 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CARNMT1Q8N4J0 409 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SVOPQ8N4V2 548 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SETD9Q8NE22 299 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 ADAM32Q8TC27 787 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 YIPF2Q9BWQ6 316 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 EMILIN2Q9BXX0 1053 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 UGT2B28Q9BY64 529 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SPATC1LQ9H0A9 340 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 ASTN1O14525 1302 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CCDC154A6NI56 674 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 KATNA1O75449 491 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 EGFRP00533 1210 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 DSG3P32926 999 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 RPL22P35268 128 aaKnown RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 TUBP50607 506 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SLC25A3Q00325 362 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 TMEM132BQ14DG7 1078 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 SCARA3Q6AZY7 606 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 DNAJC14Q6Y2X3 702 aaPredicted RBP13.38□□□□□ -0.27
LCA5-202ENST00000392959 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 VGLL2Q8N8G2 317 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 LPCAT1Q8NF37 534 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 REPS2Q8NFH8 660 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 OR56A4Q8NGH8 313 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 TRPC4APQ8TEL6 797 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 CAMKK2Q96RR4 588 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 TSPAN3O60637 253 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 MED26O95402 600 aa13.38□□□□□ -0.27
LCA5-202ENST00000392959 LRG1P02750 347 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms