RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 TTYH3Q9C0H2 523 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 UBA2Q9UBT2 640 aaPredicted RBP16.96■□□□□ 0.31
SCN3B-202ENST00000392770 CLCA2Q9UQC9 943 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 PTCH2Q9Y6C5 1203 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 SMIM28A0A1B0GU29 152 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 PTK2BQ14289 1009 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 MTFR1Q15390 333 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 SDHAF4Q5VUM1 108 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 RETSATQ6NUM9 610 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 GLT6D1Q7Z4J2 308 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 USP6NLQ92738 828 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 MRPL17Q9NRX2 175 aaKnown RBP16.96■□□□□ 0.3
SCN3B-202ENST00000392770 COG5Q9UP83 839 aa16.96■□□□□ 0.3
SCN3B-202ENST00000392770 MAP2K7O14733 419 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 GRK2P25098 689 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 ATP5C1P36542 298 aaKnown RBP16.95■□□□□ 0.3
SCN3B-202ENST00000392770 SLC1A6P48664 564 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 ZNF284Q2VY69 593 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 PSTKQ8IV42 348 aaKnown RBP16.95■□□□□ 0.3
SCN3B-202ENST00000392770 PGM2Q96G03 612 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 ZNF558Q96NG5 402 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 SRPK1Q96SB4 655 aaKnown RBP16.95■□□□□ 0.3
SCN3B-202ENST00000392770 RUBCNLQ9H714 662 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 SLC27A5Q9Y2P5 690 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 ATP4AP20648 1035 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 CYP2C18P33260 490 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 NAB1Q13506 487 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 GALNTL6Q49A17 601 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 ZNF470Q6ECI4 717 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 FAM162AQ96A26 154 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 SPATA16Q9BXB7 569 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 DPP7Q9UHL4 492 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
SCN3B-202ENST00000392770 FSCN2O14926 492 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 CCND1P24385 295 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 DUPD1Q68J44 220 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 SCARA3Q6AZY7 606 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 MON1BQ7L1V2 547 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 TMEM51Q9NW97 253 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 DDX20Q9UHI6 824 aaKnown RBP16.95■□□□□ 0.3
SCN3B-202ENST00000392770 TMEM191CA6NGB0 347 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 PAX3P23760 479 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 MATKP42679 507 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 SCTRP47872 440 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 DNMT3LQ9UJW3 386 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 GPR25O00155 361 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 PTPN20Q4JDL3 420 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 OR52K1Q8NGK4 314 aa16.95■□□□□ 0.3
SCN3B-202ENST00000392770 KCNA4P22459 653 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 KCNA10Q16322 511 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 ALG3Q92685 438 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 C4BP0C0L5 1744 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 XPNPEP1Q9NQW7 623 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 ANKRD6Q9Y2G4 727 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 ERVK-10P10266 1014 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 CNGA3Q16281 694 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 KBTBD12Q3ZCT8 623 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 ARHGAP26Q9UNA1 814 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 EIF3LQ9Y262 564 aaKnown RBP16.94■□□□□ 0.3
SCN3B-202ENST00000392770 CRADDP78560 199 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 KRT72Q14CN4 511 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 HIST2H2ACQ16777 129 aaPredicted RBP16.94■□□□□ 0.3
SCN3B-202ENST00000392770 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 HIST2H2AA3Q6FI13 130 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 SLC22A9Q8IVM8 553 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 C1orf127Q8N9H9 656 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 RGS18Q9NS28 235 aa16.94■□□□□ 0.3
SCN3B-202ENST00000392770 NQO1P15559 274 aaKnown RBP16.93■□□□□ 0.3
SCN3B-202ENST00000392770 DDR2Q16832 855 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 RASGEF1CQ8N431 466 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 CPXM1Q96SM3 734 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 E9PBE3 544 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 MGEA5O60502 916 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 KLHL41O60662 606 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 CRABP2P29373 138 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 NME5P56597 212 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 RASA2Q15283 850 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 BBS12Q6ZW61 710 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 POLR1EQ9GZS1 481 aaKnown RBP16.93■□□□□ 0.3
SCN3B-202ENST00000392770 BCAS3Q9H6U6 928 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCN3B-202ENST00000392770 PLA2G4CQ9UP65 541 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 SNX5Q9Y5X3 404 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 C5orf58C9J3I9 102 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 INPP1P49441 399 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 SPIRE1Q08AE8 756 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 ICE2Q659A1 982 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 SIAH1Q8IUQ4 282 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 ATXN2LQ8WWM7 1075 aaKnown RBP16.93■□□□□ 0.3
SCN3B-202ENST00000392770 LRRC39Q96DD0 335 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 B3GNT5Q9BYG0 378 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 DMAC2Q9NW81 257 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 NCKIPSDQ9NZQ3 722 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 ZNF536O15090 1300 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 ITGB6P18564 788 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 LCLAT1Q6UWP7 414 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 A0A096LPK6 155 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 SYNDIG1LA6NDD5 238 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 PLEKHA7Q6IQ23 1121 aa16.93■□□□□ 0.3
SCN3B-202ENST00000392770 GPR152Q8TDT2 470 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms