RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 PPM1HQ9ULR3 514 aa18.9■□□□□ 0.62
TRAF3-203ENST00000392745 TIMM13Q9Y5L4 95 aaPredicted RBP18.9■□□□□ 0.62
TRAF3-203ENST00000392745 CCDC195A0A1B0GUA6 201 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 AVILO75366 819 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 LCP1P13796 627 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 YWHAGP61981 247 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRAF3-203ENST00000392745 BST1Q10588 318 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 FAM26DQ5JW98 314 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 LHX8Q68G74 356 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 KCTD6Q8NC69 237 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 FAM192AQ9GZU8 254 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 TRPV6Q9H1D0 765 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 TDRD15B5MCY1 1934 aaKnown RBP18.89■□□□□ 0.61
TRAF3-203ENST00000392745 CABYRO75952 493 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 TM7SF2O76062 418 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 BEST1O76090 585 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 POMCP01189 267 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 IL1BP01584 269 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
TRAF3-203ENST00000392745 TFE3P19532 575 aaPredicted RBP18.89■□□□□ 0.61
TRAF3-203ENST00000392745 AZIN2Q96A70 460 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 HNRNPABQ99729 332 aaKnown RBP18.89■□□□□ 0.61
TRAF3-203ENST00000392745 KCNK4Q9NYG8 393 aa18.89■□□□□ 0.61
TRAF3-203ENST00000392745 TRIM49D1C9J1S8 452 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 COPEO14579 308 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 ACTR3P61158 418 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 UPP1Q16831 310 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 SLC5A9Q2M3M2 681 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 GLT1D1Q96MS3 346 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 NDE1Q9NXR1 346 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 EFR3BQ9Y2G0 817 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 KLF11O14901 512 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 INHAP05111 366 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 CDC16Q13042 620 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 CUL3Q13618 768 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 LAMB3Q13751 1172 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 DPYSL3Q14195 570 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 CNPY1Q3B7I2 92 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 RASIP1Q5U651 963 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 BBS12Q6ZW61 710 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 ZDHHC17Q8IUH5 632 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 EPAS1Q99814 870 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 IQCGQ9H095 443 aaKnown RBP18.88■□□□□ 0.61
TRAF3-203ENST00000392745 RSAD1Q9HA92 442 aa18.88■□□□□ 0.61
TRAF3-203ENST00000392745 DPYSL4O14531 572 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 CIB2O75838 187 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 ENDOD1O94919 500 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 CKBP12277 381 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 APLP1P51693 650 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 ALDH18A1P54886 795 aaKnown RBP18.87■□□□□ 0.61
TRAF3-203ENST00000392745 TMPRSS15P98073 1019 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 MMRN1Q13201 1228 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 TRMT5Q32P41 509 aaKnown RBP18.87■□□□□ 0.61
TRAF3-203ENST00000392745 C1orf146Q5VVC0 180 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 PIGZQ86VD9 579 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 FAM172AQ8WUF8 416 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 NDRG1Q92597 394 aaKnown RBP18.87■□□□□ 0.61
TRAF3-203ENST00000392745 DUSP16Q9BY84 665 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 NGRNQ9NPE2 291 aaKnown RBP18.87■□□□□ 0.61
TRAF3-203ENST00000392745 CRTAC1Q9NQ79 661 aa18.87■□□□□ 0.61
TRAF3-203ENST00000392745 SPECC1L-ADORA2AF8WAN1 911 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 I3L4J1 428 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 RNASEH1O60930 286 aaKnown RBP18.86■□□□□ 0.61
TRAF3-203ENST00000392745 FAM163BP0C2L3 166 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 CRABP2P29373 138 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 SDC4P31431 198 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 AQP5P55064 265 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 SNX16P57768 344 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 AP2B1P63010 937 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 TIGD5Q53EQ6 642 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 RAPH1Q70E73 1250 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 CTAGE3PQ8IX95 158 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 C20orf27Q9GZN8 174 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRAF3-203ENST00000392745 TAGLN3Q9UI15 199 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 TEX264Q9Y6I9 313 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 MEI4A8MW99 385 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 PRR5-ARHGAP8B1AHC4 643 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 VEGFBP49765 207 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 EIF3EP60228 445 aaKnown RBP18.86■□□□□ 0.61
TRAF3-203ENST00000392745 MRPS5P82675 430 aaKnown RBP18.86■□□□□ 0.61
TRAF3-203ENST00000392745 ARHGAP8P85298 464 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 MBTPS1Q14703 1052 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 CHI3L2Q15782 390 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 SCYL2Q6P3W7 929 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 TRAF7Q6Q0C0 670 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 RTN4RL1Q86UN2 441 aaPredicted RBP18.86■□□□□ 0.61
TRAF3-203ENST00000392745 PPM1NQ8N819 430 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 CFAP36Q96G28 342 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 HSFY1Q96LI6 401 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 CALN1Q9BXU9 219 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 EBF3Q9H4W6 596 aa18.86■□□□□ 0.61
TRAF3-203ENST00000392745 MOXD2PA6NHM9 499 aa18.85■□□□□ 0.61
TRAF3-203ENST00000392745 CXorf49A8MYA2 514 aaPredicted RBP18.85■□□□□ 0.61
TRAF3-203ENST00000392745 XPO1O14980 1071 aaKnown RBP18.85■□□□□ 0.61
TRAF3-203ENST00000392745 PRPSAP2O60256 369 aa18.85■□□□□ 0.61
TRAF3-203ENST00000392745 RPL9P32969 192 aaKnown RBP18.85■□□□□ 0.61
TRAF3-203ENST00000392745 HDAC4P56524 1084 aa18.85■□□□□ 0.61
TRAF3-203ENST00000392745 UBAP2LQ14157 1087 aaKnown RBP18.85■□□□□ 0.61
TRAF3-203ENST00000392745 PAN2Q504Q3 1202 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms