RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 TAOK1Q7L7X3 1001 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 PALM2Q8IXS6 379 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 TMEM199Q8N511 208 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 COLGALT1Q8NBJ5 622 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 NETO2Q8NC67 525 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 FCRL2Q96LA5 508 aaPredicted RBP21.96■■□□□ 1.11
SPHK1-202ENST00000392496 HERC2P3Q9BVR0 1158 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 CATSPERBQ9H7T0 1116 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 EURLQ9NYK6 297 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 HSFX1Q9UBD0 423 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 AFF4Q9UHB7 1163 aaKnown RBP21.96■■□□□ 1.11
SPHK1-202ENST00000392496 NR2E3Q9Y5X4 410 aa21.96■■□□□ 1.11
SPHK1-202ENST00000392496 SRGAP2BP0DMP2 458 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 LAG3P18627 525 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 MMP13P45452 471 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 ZNF33AQ06730 810 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 PARP6Q2NL67 630 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 RASIP1Q5U651 963 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 RWDD4Q6NW29 188 aaKnown RBP21.95■■□□□ 1.1
SPHK1-202ENST00000392496 ZNF771Q7L3S4 317 aaPredicted RBP21.95■■□□□ 1.1
SPHK1-202ENST00000392496 CAND1Q86VP6 1230 aaKnown RBP21.95■■□□□ 1.1
SPHK1-202ENST00000392496 LZTR1Q8N653 840 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 TMEM169Q96HH4 297 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 IGSF9Q9P2J2 1179 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 FETUBQ9UGM5 382 aa21.95■■□□□ 1.1
SPHK1-202ENST00000392496 BAIAP3O94812 1187 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 ATF6P18850 670 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 GARSP41250 739 aaKnown RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 ELK3P41970 407 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 MLLT6P55198 1093 aaPredicted RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 SARNPP82979 210 aaKnown RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 COG7P83436 770 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 DSG1Q02413 1049 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 EFEMP1Q12805 493 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 BTG3Q14201 252 aaPredicted RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 RASA2Q15283 850 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 TRIP4Q15650 581 aaPredicted RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 SYCP2LQ5T4T6 812 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 ARTNQ5T4W7 220 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 ZNF567Q8N184 647 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 LRRC39Q96DD0 335 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 CLSTN3Q9BQT9 956 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 XAB2Q9HCS7 855 aaKnown RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 EIF2B3Q9NR50 452 aaKnown RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 SEPT10Q9P0V9 454 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 SLC24A2Q9UI40 661 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 HS3ST4Q9Y661 456 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 SPAG6O75602 509 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 APOEP02649 317 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 RPL17P18621 184 aaKnown RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 MAGEA3P43357 314 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 TPGS2Q68CL5 300 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 FAM117BQ6P1L5 589 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 C3orf62Q6ZUJ4 267 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 EXOC3L1Q86VI1 746 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 GIPC2Q8TF65 315 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 DPF3Q92784 378 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 UBE2OQ9C0C9 1292 aaKnown RBP21.94■■□□□ 1.1
SPHK1-202ENST00000392496 RABGEF1Q9UJ41 708 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 CHMP2BQ9UQN3 213 aa21.94■■□□□ 1.1
SPHK1-202ENST00000392496 MOCS2O96007 188 aaPredicted RBP21.93■■□□□ 1.1
SPHK1-202ENST00000392496 PTPN3P26045 913 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 GCAP28676 217 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 SSTR1P30872 391 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 GUCY1A3Q02108 690 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 DMTNQ08495 405 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 CAPN12Q6ZSI9 719 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 ZNF276Q8N554 614 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 ATP6V0D2Q8N8Y2 350 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 ARHGEF2Q92974 986 aaKnown RBP21.93■■□□□ 1.1
SPHK1-202ENST00000392496 VAT1Q99536 393 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 SPG21Q9NZD8 308 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 CTNNAL1Q9UBT7 734 aa21.93■■□□□ 1.1
SPHK1-202ENST00000392496 MRPL42Q9Y6G3 142 aaKnown RBP21.93■■□□□ 1.1
SPHK1-202ENST00000392496 WASH4PA8MWX3 477 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 E9PAM4 449 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 ABLIM3O94929 683 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 MLNP12872 115 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 KLHL38Q2WGJ6 581 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 C10orf120Q5SQS8 335 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 LEKR1Q6ZMV7 388 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 ZNF534Q76KX8 674 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 TMCO2Q7Z6W1 182 aaPredicted RBP21.92■■□□□ 1.1
SPHK1-202ENST00000392496 IGDCC3Q8IVU1 814 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 ZNF461Q8TAF7 563 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 OVCA2Q8WZ82 227 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 CDK5RAP1Q96SZ6 601 aaKnown RBP21.92■■□□□ 1.1
SPHK1-202ENST00000392496 ACSS3Q9H6R3 686 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 MARCH2Q9P0N8 246 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 FNIP2Q9P278 1114 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 TRHDEQ9UKU6 1024 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 SRRM3A6NNA2 597 aaPredicted RBP21.92■■□□□ 1.1
SPHK1-202ENST00000392496 C2CD2LO14523 706 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 AVILO75366 819 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 TUBP50607 506 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 GLIPR1L2Q4G1C9 344 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 ACBD5Q5T8D3 534 aaPredicted RBP21.92■■□□□ 1.1
SPHK1-202ENST00000392496 PIK3R6Q5UE93 754 aa21.92■■□□□ 1.1
SPHK1-202ENST00000392496 TTC19Q6DKK2 380 aaPredicted RBP21.92■■□□□ 1.1
SPHK1-202ENST00000392496 PID1Q7Z2X4 250 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms