RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ATF4P18848 351 aaPredicted RBP16.48■□□□□ 0.23
SHANK1-204ENST00000391814 SV2CQ496J9 727 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 DNAJC14Q6Y2X3 702 aaPredicted RBP16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MCOLN2Q8IZK6 566 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 A1CFQ9NQ94 594 aaKnown RBP16.48■□□□□ 0.23
SHANK1-204ENST00000391814 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 NEK3P51956 506 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 ZFP69Q49AA0 526 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MTX3Q5HYI7 312 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MREGQ8N565 214 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MXRA8Q9BRK3 442 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MLPHQ9BV36 600 aaPredicted RBP16.48■□□□□ 0.23
SHANK1-204ENST00000391814 PRRG3Q9BZD7 231 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 CCNKO75909 580 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 AKAP3O75969 853 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MSLNQ13421 630 aaPredicted RBP16.48■□□□□ 0.23
SHANK1-204ENST00000391814 RABL6Q3YEC7 729 aaPredicted RBP16.48■□□□□ 0.23
SHANK1-204ENST00000391814 TMC7Q7Z402 723 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 CBWD1Q9BRT8 395 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 ISCA1Q9BUE6 129 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 ADCY10Q96PN6 1610 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 TTLL13PA6NNM8 815 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 STARP49675 285 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 TNK2Q07912 1038 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 NT5DC1Q5TFE4 455 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 TAF8Q7Z7C8 310 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ACTRT2Q8TDY3 377 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ELOVL6Q9H5J4 265 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 AP4E1Q9UPM8 1137 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 INVSQ9Y283 1065 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ERBB3P21860 1342 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 C2orf71A6NGG8 1288 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 MSH4O15457 936 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ATP6V1G1O75348 118 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 IL18R1Q13478 541 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 LRRC17Q8N6Y2 441 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 FLAD1Q8NFF5 587 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ZNF224Q9NZL3 707 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 GPC1P35052 558 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 TMEM132CQ8N3T6 1108 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 GSTCDQ8NEC7 633 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 DPP3Q9NY33 737 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ZMYM5Q9UJ78 669 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 CRB1P82279 1406 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 A0A087X0B3 334 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 KCNH1O95259 989 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 PRKAA2P54646 552 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 FRG1Q14331 258 aaKnown RBP16.47■□□□□ 0.23
SHANK1-204ENST00000391814 PPP1R15BQ5SWA1 713 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 KYAT3Q6YP21 454 aaKnown RBP16.47■□□□□ 0.23
SHANK1-204ENST00000391814 C16orf62Q7Z3J2 963 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 S100A14Q9HCY8 104 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 VPS9D1Q9Y2B5 631 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 PCDHA11Q9Y5I1 949 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 TRIM38O00635 465 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 CD3EAPO15446 510 aaKnown RBP16.47■□□□□ 0.23
SHANK1-204ENST00000391814 STAU1O95793 577 aaKnown RBP16.47■□□□□ 0.23
SHANK1-204ENST00000391814 POU6F1Q14863 301 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 MEA1Q16626 185 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 GALNT18Q6P9A2 607 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ACTL9Q8TC94 416 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 PROX1Q92786 737 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 ING3Q9NXR8 418 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 STON1Q9Y6Q2 735 aa16.47■□□□□ 0.23
SHANK1-204ENST00000391814 IQSEC2Q5JU85 1478 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 A0A1W2PRG6 482 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 MAGEB2O15479 319 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 GLP2RO95838 553 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 USP4Q13107 963 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 MAN1C1Q9NR34 630 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 DRG1Q9Y295 367 aaKnown RBP16.46■□□□□ 0.23
SHANK1-204ENST00000391814 VAPBO95292 243 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PBLDP30039 288 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PDK4Q16654 411 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 C16orf86Q6ZW13 317 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 SLC25A23Q9BV35 468 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PLA2G4CQ9UP65 541 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 TSPAN4O14817 238 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 TFECO14948 347 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-204ENST00000391814 UPP2O95045 317 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PIGNO95427 931 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PTGS2P35354 604 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PGBD3Q8N328 593 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 ADPRHL2Q9NX46 363 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 MAP3K20Q9NYL2 800 aaKnown RBP16.46■□□□□ 0.23
SHANK1-204ENST00000391814 KHDRBS3O75525 346 aaKnown RBP16.46■□□□□ 0.23
SHANK1-204ENST00000391814 CNPY1Q3B7I2 92 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PGBD2Q6P3X8 592 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 PAGE2Q7Z2X7 111 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 FBXO6Q9NRD1 293 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-204ENST00000391814 RPS6KB2Q9UBS0 482 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 GMPPBQ9Y5P6 360 aa16.46■□□□□ 0.23
SHANK1-204ENST00000391814 NPTXRO95502 500 aa16.46■□□□□ 0.22
SHANK1-204ENST00000391814 GP5P40197 560 aa16.46■□□□□ 0.22
SHANK1-204ENST00000391814 PARP6Q2NL67 630 aa16.46■□□□□ 0.22
SHANK1-204ENST00000391814 LACTB2Q53H82 288 aaPredicted RBP16.46■□□□□ 0.22
SHANK1-204ENST00000391814 EIF3MQ7L2H7 374 aaKnown RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms