RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 SEMA4BQ9NPR2 832 aaPredicted RBP2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 PRDM8Q9NQV8 689 aa2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 ZBTB40Q9NUA8 1239 aa2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 TMEM45AQ9NWC5 275 aa2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 HERC5Q9UII4 1024 aaKnown RBP2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 CDC23Q9UJX2 597 aa2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 HS3ST3B1Q9Y662 390 aa2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 WDR81Q562E7 1941 aa2.62□□□□□ -1.99
RNU6-541P-201ENST00000384709 FAM90A20PA6NIJ5 464 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 EFCAB8A8MWE9 144 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 SPTLC2O15270 562 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 OAZ2O95190 189 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 EPN2O95208 641 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 NTN1O95631 604 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 LCKP06239 509 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 IGKV2-30P06310 120 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 ITGA2BP08514 1039 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 CPA2P48052 419 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 ME1P48163 572 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 TAS2R50P59544 299 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 ICA1Q05084 483 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 DCTN1Q14203 1278 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 PGM5Q15124 567 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 PUM3Q15397 648 aaKnown RBP2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 ANXA2RQ3ZCQ2 193 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 PIK3CD-AS1Q5SR53 167 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 AWAT2Q6E213 333 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 ISM2Q6H9L7 571 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 LIN54Q6MZP7 749 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 NFRKBQ6P4R8 1299 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 CACNA2D3Q8IZS8 1091 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 OTUD7AQ8TE49 926 aaPredicted RBP2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 KAT2BQ92831 832 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 REXO5Q96IC2 774 aaKnown RBP2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 RMDN3Q96TC7 470 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 RTKNQ9BST9 563 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 CRB3Q9BUF7 120 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 MECRQ9BV79 373 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 TRIM2Q9C040 744 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 PABPC3Q9H361 631 aaKnown RBP2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 EPS8L2Q9H6S3 715 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 SPAG4Q9NPE6 437 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 PLCB1Q9NQ66 1216 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 C19orf53Q9UNZ5 99 aaPredicted RBP2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 SLC12A4Q9UP95 1085 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 LRCH1Q9Y2L9 728 aa2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 COPG1Q9Y678 874 aaKnown RBP2.61□□□□□ -1.99
RNU6-541P-201ENST00000384709 SCN5AQ14524 2016 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 FAM90A10PA6NDY2 464 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 PROB1E7EW31 1015 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 TULP3O75386 442 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 FAM155BO75949 473 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 TNFRSF6BO95407 300 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 IFNA2P01563 188 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 ALDOAP04075 364 aaKnown RBP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 CSTBP04080 98 aaKnown RBP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 VEGFAP15692 232 aaPredicted RBP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 YY1P25490 414 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 GRK5P34947 590 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 KRTAP10-6P60371 365 aaPredicted RBP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 AP2B1P63010 937 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 SHC2P98077 582 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 SF3A3Q12874 501 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 LIPMQ5VYY2 423 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 ERAP2Q6P179 960 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 NOL8Q76FK4 1167 aaKnown RBP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 BHLHA9Q7RTU4 235 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 MDGA2Q7Z553 956 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 ZNF548Q8NEK5 533 aaPredicted RBP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 SDCCAG3Q96C92 435 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 HTATIP2Q9BUP3 242 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 CCDC134Q9H6E4 229 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 PRDM16Q9HAZ2 1276 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 THSD1Q9NS62 852 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 LIN7CQ9NUP9 197 aaKnown RBP2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 TAGLN3Q9UI15 199 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 DAPP1Q9UN19 280 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 LZTS1Q9Y250 596 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 DTX4Q9Y2E6 619 aa2.6□□□□□ -1.99
RNU6-541P-201ENST00000384709 GAGE12JA6NER3 117 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 KIF28PB7ZC32 967 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 MCIDASD6RGH6 385 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 ACKR2O00590 384 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 NEURL1O76050 574 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 ACTL6BO94805 426 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 BMP15O95972 392 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 ALDOCP09972 364 aaKnown RBP2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 ITGB6P18564 788 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 TBXAS1P24557 533 aaPredicted RBP2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 ALDH7A1P49419 539 aaKnown RBP2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 MCM2P49736 904 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 RASSF2P50749 326 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 PLCD1P51178 756 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 RHBDL3P58872 404 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 LINC00205P59089 165 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 RHAGQ02094 409 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 BLMHQ13867 455 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 DLGAP5Q15398 846 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 SMTNL2Q2TAL5 461 aa2.59□□□□□ -1.99
RNU6-541P-201ENST00000384709 BTBD16Q32M84 506 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms