RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 PSMD8P48556 350 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 ST8SIA6P61647 398 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 DAB2P98082 770 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 AMPD3Q01432 767 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 SRSF1Q07955 248 aaKnown RBP eCLIP18.02■□□□□ 0.48
HMGN1-203ENST00000380748 SFSWAPQ12872 951 aaKnown RBP18.02■□□□□ 0.48
HMGN1-203ENST00000380748 C1orf220Q5T0J3 134 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 CDCP2Q5VXM1 449 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 KIAA1614Q5VZ46 1190 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 NAPEPLDQ6IQ20 393 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 PRICKLE2Q7Z3G6 844 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 MFSD2AQ8NA29 543 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 OR14C36Q8NHC7 312 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 LMLNQ96KR4 655 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 MRGPRX3Q96LB0 322 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 C7orf25Q9BPX7 421 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 ULBP1Q9BZM6 244 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 BLZF1Q9H2G9 400 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 CUEDC2Q9H467 287 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 CYP3A43Q9HB55 503 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 ASCL3Q9NQ33 180 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 DMAC2Q9NW81 257 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 HBS1LQ9Y450 684 aaKnown RBP18.02■□□□□ 0.48
HMGN1-203ENST00000380748 MORC2Q9Y6X9 1032 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-203ENST00000380748 LATO43561 262 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 USP12O75317 370 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 ZBED1O96006 694 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 CSKP41240 450 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 CSRP3P50461 194 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 TKTL1P51854 596 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 ERVPABLB-1P60509 514 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 ZNF211Q13398 564 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-203ENST00000380748 LSMEM2Q8N112 164 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 EDEM1Q92611 657 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 TTC17Q96AE7 1141 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 TRIM4Q9C037 500 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 NIF3L1Q9GZT8 377 aa18.01■□□□□ 0.47
HMGN1-203ENST00000380748 OLA1Q9NTK5 396 aaKnown RBP18.01■□□□□ 0.47
HMGN1-203ENST00000380748 INTS6Q9UL03 887 aaKnown RBP18.01■□□□□ 0.47
HMGN1-203ENST00000380748 NYNRINQ9P2P1 1898 aaKnown RBP18.01■□□□□ 0.47
HMGN1-203ENST00000380748 GOLGA6L7A0A1B0GV03 622 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 TTC34A8MYJ7 566 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 OPA1O60313 960 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 LATS1O95835 1130 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 SLFN14P0C7P3 912 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 GOT1P17174 413 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 CTSOP43234 321 aaPredicted RBP18■□□□□ 0.47
HMGN1-203ENST00000380748 LSSP48449 732 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 PIK3R6Q5UE93 754 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 PM20D1Q6GTS8 502 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 SND1Q7KZF4 910 aaKnown RBP eCLIP18■□□□□ 0.47
HMGN1-203ENST00000380748 SLC25A45Q8N413 288 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 GOLGA5Q8TBA6 731 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 TMC2Q8TDI7 906 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 VCPIP1Q96JH7 1222 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 HEXIM2Q96MH2 286 aaKnown RBP18■□□□□ 0.47
HMGN1-203ENST00000380748 FAM129BQ96TA1 746 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 DPH1Q9BZG8 443 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 UBXN6Q9BZV1 441 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 POLR1BQ9H9Y6 1135 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 STIM2Q9P246 746 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 ARHGAP20Q9P2F6 1191 aa18■□□□□ 0.47
HMGN1-203ENST00000380748 DOCK9Q9BZ29 2069 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3DA0A087WVF3 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3IA0A087WXS9 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3EA0A087X179 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3KA0A087X1G2 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 A0A1B0GVM2 712 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3FA6NER0 549 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3LB9A6J9 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TULP2O00295 520 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 CSO75390 466 aaKnown RBP17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3HP0C7X1 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 MAT2AP31153 395 aaKnown RBP17.99■□□□□ 0.47
HMGN1-203ENST00000380748 SLC6A4P31645 630 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 MPP7Q5T2T1 576 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3GQ6DHY5 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3CQ6IPX1 549 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TMC6Q7Z403 805 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 MFN1Q8IWA4 741 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TBC1D3Q8IZP1 549 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-203ENST00000380748 TAS1R2Q8TE23 839 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 RNF139Q8WU17 664 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 DEPDC7Q96QD5 511 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 IMPG2Q9BZV3 1241 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 CAAP1Q9H8G2 361 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 UCKL1Q9NWZ5 548 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 CA5BQ9Y2D0 317 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 SSUH2Q9Y2M2 353 aa17.99■□□□□ 0.47
HMGN1-203ENST00000380748 FLNCQ14315 2725 aa17.98■□□□□ 0.47
HMGN1-203ENST00000380748 K7ENP7 123 aa17.98■□□□□ 0.47
HMGN1-203ENST00000380748 IKBKBO14920 756 aa17.98■□□□□ 0.47
HMGN1-203ENST00000380748 FFAR2O15552 330 aa17.98■□□□□ 0.47
HMGN1-203ENST00000380748 ASLP04424 464 aa17.98■□□□□ 0.47
HMGN1-203ENST00000380748 MYF5P13349 255 aa17.98■□□□□ 0.47
HMGN1-203ENST00000380748 METAP1P53582 386 aa17.98■□□□□ 0.47
HMGN1-203ENST00000380748 FAM133BQ5BKY9 247 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms