RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MYCBPAPQ8TBZ2 947 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 USP7Q93009 1102 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 IL22Q9GZX6 179 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 ZCCHC17Q9NP64 241 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CYLDQ9NQC7 956 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 KIAA1522Q9P206 1035 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 RUVBL2Q9Y230 463 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TBC1D30Q9Y2I9 924 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 PRR23D1E9PI22 279 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 PRR23D2P0DMB1 279 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CPA3P15088 417 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 GPR15P49685 360 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SMIM11AP58511 58 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 GTF2BQ00403 316 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 RAB30Q15771 203 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 GLT6D1Q7Z4J2 308 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 STRA8Q7Z7C7 330 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CHP1Q99653 195 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 DPY30Q9C005 99 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 ZYG11BQ9C0D3 744 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 IQGAP1P46940 1657 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 TMEM120BA0PK00 339 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 WWP2O00308 870 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ENO1P06733 434 aaKnown RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ANXA5P08758 320 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CHN1P15882 459 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 PTENP60484 403 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 SH3BP5LQ7L8J4 393 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 MON1AQ86VX9 555 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CAMKK1Q8N5S9 505 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 MOSPD2Q8NHP6 518 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 FAM120BQ96EK7 910 aaKnown RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 GAD1Q99259 594 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 OLFM1Q99784 485 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ADNPQ9H2P0 1102 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 PAPOLBQ9NRJ5 636 aaKnown RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 IARS2Q9NSE4 1012 aaKnown RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ZSCAN32Q9NX65 697 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ERVW-1Q9UQF0 538 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ARIH1Q9Y4X5 557 aaPredicted RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 SAC3D1A6NKF1 404 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 SYN3O14994 580 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CYTH3O43739 400 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 DNTTP04053 509 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 COL6A1P12109 1028 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 SERPINH1P50454 418 aaKnown RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 RGS1Q08116 209 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 FAM45BPQ6NSW5 357 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 GALNT18Q6P9A2 607 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ADCK1Q86TW2 530 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 COLGALT2Q8IYK4 626 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ANKRD52Q8NB46 1076 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 FBXO36Q8NEA4 188 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 SLC2A14Q8TDB8 520 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 IRGQQ8WZA9 623 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 BBS4Q96RK4 519 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 TTPALQ9BTX7 342 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 COMMD8Q9NX08 183 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ADPRHL2Q9NX46 363 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 MEI4A8MW99 385 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CD3EAPO15446 510 aaKnown RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 RAD51CO43502 376 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 FARP2O94887 1054 aaPredicted RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 FGFR1P11362 822 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CENPAP49450 140 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 COPZ1P61923 177 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 VSNL1P62760 191 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CAPRIN2Q6IMN6 1127 aaKnown RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 SLC24A5Q71RS6 500 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 C11orf96Q7Z7L8 435 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CDR2LQ86X02 465 aaPredicted RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 C12orf56Q8IXR9 622 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 DEFB106AQ8N104 65 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 TSC22D3Q99576 134 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 C11orf84Q9BUA3 381 aaPredicted RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 HIPK3Q9H422 1215 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 LRRC4BQ9NT99 713 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 RCOR3Q9P2K3 495 aaPredicted RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ASTN2O75129 1339 aaPredicted RBP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 KIDINS220Q9ULH0 1771 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ANKDD1BA6NHY2 528 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 LRRC14BA6NHZ5 514 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 MICAL2O94851 1124 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 YBX3P16989 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CLCN5P51795 746 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 BLVRAP53004 296 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CASP7P55210 303 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 EPS8Q12929 822 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 PTPN21Q16825 1174 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CRY2Q49AN0 593 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 MPPE1Q53F39 396 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 PCID2Q5JVF3 399 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 MROH9Q5TGP6 573 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 KATNAL2Q8IYT4 538 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ACTRT2Q8TDY3 377 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 CNBD2Q96M20 576 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 VPS45Q9NRW7 570 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 ASB3Q9Y575 518 aa7.31□□□□□ -1.24
CCDC171-201ENST00000380701 IRF6O14896 467 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms