RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 ASIC4Q96FT7 647 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SH3YL1Q96HL8 342 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 REXO5Q96IC2 774 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ASB2Q96Q27 587 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SCPEP1Q9HB40 452 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 NEK6Q9HC98 313 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 CPNE5Q9HCH3 593 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ATPIF1Q9UII2 106 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 DAPK2Q9UIK4 370 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 VPS28Q9UK41 221 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TESMINQ9Y4I5 508 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 COL4A3BPQ9Y5P4 624 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ZHX2Q9Y6X8 837 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 MN1Q10571 1320 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 A0A0B4J203 849 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 FAM237BA0A1B0GVD1 139 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 MEI4A8MW99 385 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 PRR5-ARHGAP8B1AHC4 643 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 H7C0C1 242 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 KLHL41O60662 606 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 RNGTTO60942 597 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ZC3H11AO75152 810 aaKnown RBP eCLIP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ITGAXP20702 1163 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SRP54P61011 504 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ARHGAP8P85298 464 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 FAAP100Q0VG06 881 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TARDBPQ13148 414 aaKnown RBP eCLIP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 MESDQ14696 234 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 STK11Q15831 433 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TJAP1Q5JTD0 557 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 FIP1L1Q6UN15 594 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 LYPD8Q6UX82 237 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 UNC5DQ6UXZ4 953 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TRIM72Q6ZMU5 477 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 DGLUCYQ7Z3D6 616 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SLC13A5Q86YT5 568 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SLC26A7Q8TE54 656 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 JDP2Q8WYK2 163 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TTC17Q96AE7 1141 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 RNF170Q96K19 258 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 FRMD8Q9BZ67 464 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 NAA50Q9GZZ1 169 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 NARFLQ9H6Q4 476 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ZNF277Q9NRM2 450 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SLC24A2Q9UI40 661 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 MYRFQ9Y2G1 1151 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 KLF2Q9Y5W3 355 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SNNO75324 88 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SEC24DO94855 1032 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TNNI1P19237 187 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 EPHA3P29320 983 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 GHRHRQ02643 423 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 GNA12Q03113 381 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 KRT17Q04695 432 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TNK2Q07912 1038 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 PMS2P3Q13401 168 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 CDK10Q15131 360 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 GRAMD1BQ3KR37 738 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 FAM47CQ5HY64 1035 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SNX32Q86XE0 403 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 HERC6Q8IVU3 1022 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 C4orf33Q8N1A6 199 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ZCCHC9Q8N567 271 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 ASCC1Q8N9N2 400 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 CMASQ8NFW8 434 aaPredicted RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SH3KBP1Q96B97 665 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SLC39A13Q96H72 371 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 PWWP2AQ96N64 755 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TUBA1CQ9BQE3 449 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 BEGAINQ9BUH8 593 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 TARS2Q9BW92 718 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SP140LQ9H930 580 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 DUS2Q9NX74 493 aaKnown RBP6.74□□□□□ -1.33
RIPK1-202ENST00000380409 SLC17A7Q9P2U7 560 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 POLHQ9Y253 713 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 AUP1Q9Y679 476 aa6.74□□□□□ -1.33
RIPK1-202ENST00000380409 FAM205AQ6ZU69 1335 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 CACNA1SQ13698 1873 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 TEX51A0A1B0GUA7 166 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 GOLGA8IPA6NC78 632 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 GOLGA8JA6NMD2 632 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 USP17L10C9JJH3 530 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 FSCN2O14926 492 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 DYRK3O43781 588 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 CALUO43852 315 aaPredicted RBP6.73□□□□□ -1.33
RIPK1-202ENST00000380409 UCHL3P15374 230 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 CD19P15391 556 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 PSMC3P17980 439 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 TTKP33981 857 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 OPRL1P41146 370 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 NKX2-5P52952 324 aaPredicted RBP6.73□□□□□ -1.33
RIPK1-202ENST00000380409 FKBP3Q00688 224 aaKnown RBP6.73□□□□□ -1.33
RIPK1-202ENST00000380409 ZBTB16Q05516 673 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 ITGADQ13349 1161 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 SNTA1Q13424 505 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 RAB39AQ14964 217 aa6.73□□□□□ -1.33
RIPK1-202ENST00000380409 TRIP13Q15645 432 aaPredicted RBP6.73□□□□□ -1.33
RIPK1-202ENST00000380409 DALRD3Q5D0E6 543 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms