RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 NMT1P30419 496 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CHRNA5P30532 468 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 AP2S1P53680 142 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CD83Q01151 205 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 SQLEQ14534 574 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CHERPQ8IWX8 916 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 CPA6Q8N4T0 437 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 LHFPL5Q8TAF8 219 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 RBM14Q96PK6 669 aaKnown RBP9.6□□□□□ -0.87
PTPRA-204ENST00000380393 BTBD2Q9BX70 525 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 LIN7BQ9HAP6 207 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 PNPLA3Q9NST1 481 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 MKL2Q9ULH7 1088 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 PCDHA3Q9Y5H8 950 aa9.6□□□□□ -0.87
PTPRA-204ENST00000380393 RIC1Q4ADV7 1423 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 SF3B1O75533 1304 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■■■ 128.4
PTPRA-204ENST00000380393 TEX51A0A1B0GUA7 166 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 SPAG6O75602 509 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 PDE8BO95263 885 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 OLFM2O95897 454 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 H2AFZP0C0S5 128 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ITIH2P19823 946 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ARNTP27540 789 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ALDH18A1P54886 795 aaKnown RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 UBXN2AP68543 259 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 CDK10Q15131 360 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 PPP1R3AQ16821 1122 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 FAM182AQ5T1J6 154 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 METTL11BQ5VVY1 283 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 CENPUQ71F23 418 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 H2AFVQ71UI9 128 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 CDR2LQ86X02 465 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 BLIDQ8IZY5 108 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ADCY4Q8NFM4 1077 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 HM13Q8TCT9 377 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 HTRA1Q92743 480 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 MARC2Q969Z3 335 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 SECISBP2Q96T21 854 aaKnown RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 RPRD1BQ9NQG5 326 aaKnown RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 SEPT11Q9NVA2 429 aaKnown RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 FETUBQ9UGM5 382 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 CHD4Q14839 1912 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 FAM205AQ6ZU69 1335 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 MAGEB16A2A368 324 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 OR5K3A6NET4 321 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 PRR5-ARHGAP8B1AHC4 643 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 NCAM2O15394 837 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 LRPAP1P30533 357 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 HTR2BP41595 481 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 SLC18A1P54219 525 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 RPS8P62241 208 aaKnown RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ARHGAP8P85298 464 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 NFIAQ12857 509 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 DLG2Q15700 870 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 C5orf22Q49AR2 442 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-204ENST00000380393 AGMOQ6ZNB7 445 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 HPS6Q86YV9 775 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 SIMC1Q8NDZ2 872 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 TRIM9Q9C026 710 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 NYXQ9GZU5 481 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ABCG4Q9H172 646 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 DPEP3Q9H4B8 488 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 MINPP1Q9UNW1 487 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 TMEM5Q9Y2B1 443 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 TESMINQ9Y4I5 508 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ECM29Q5VYK3 1845 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 ANKRD36CQ5JPF3 1778 aa9.59□□□□□ -0.87
PTPRA-204ENST00000380393 PRR23AA6NEV1 266 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 TOMM70O94826 608 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 KCNH1O95259 989 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CHRNB2P17787 502 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 NPTX2P47972 431 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 SRP54P61011 504 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 VAC14Q08AM6 782 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 ADGRE1Q14246 886 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 DLGAP5Q15398 846 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 NRF1Q16656 503 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 MTERF2Q49AM1 385 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 FAM209BQ5JX69 171 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CNNM4Q6P4Q7 775 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 KBTBD6Q86V97 674 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 GLIS3Q8NEA6 775 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 PDCD6IPQ8WUM4 868 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 PWWP2AQ96N64 755 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 SNX18Q96RF0 628 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 WACQ9BTA9 647 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 C1orf21Q9H246 121 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 COPS7BQ9H9Q2 264 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 VAT1LQ9HCJ6 419 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CDH22Q9UJ99 828 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 DNMT3LQ9UJW3 386 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 ANAPC5Q9UJX4 755 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 NAGPAQ9UK23 515 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 TCRBV5S4A2TA0A5A2 114 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 DDX3YO15523 660 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 SERPINI2O75830 405 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms