RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ADCY4Q8NFM4 1077 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 DNAJC19Q96DA6 116 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 NLRP4Q96MN2 994 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ZNF717Q9BY31 904 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 VPS11Q9H270 941 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 NOL6Q9H6R4 1146 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 RMND5AQ9H871 391 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 SP140LQ9H930 580 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 CXorf21Q9HAI6 301 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 C8orf4Q9NR00 106 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 POLIQ9UNA4 740 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 PCP4L1A6NKN8 68 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 FADS2P1A8MWK0 482 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 H0YCG3 227 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 FZD9O00144 591 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ZW10O43264 779 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 PLA2G4BP0C869 781 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 KRT5P13647 590 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 RPL10P27635 214 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 RFC1P35251 1148 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 GJA9P57773 515 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 RACK1P63244 317 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 OTUD4Q01804 1114 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 TAGLNQ01995 201 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 SPIRE1Q08AE8 756 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 TRAF2Q12933 501 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 IRF5Q13568 498 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 COG2Q14746 738 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 UBE2SQ16763 222 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ANO4Q32M45 955 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 NEK5Q6P3R8 708 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 KCTD1Q719H9 257 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ZC3H7AQ8IWR0 971 aaKnown RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 FIBCD1Q8N539 461 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 CATSPER1Q8NEC5 780 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 OLIG1Q8TAK6 271 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ZNF420Q8TAQ5 688 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 TCP10LQ8TDR4 215 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 RMND5BQ96G75 393 aaPredicted RBP7.67□□□□□ -1.18
CDKL5-201ENST00000379989 TXNDC15Q96J42 360 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 C1orf74Q96LT6 269 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 SENP7Q9BQF6 1050 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 EMILIN2Q9BXX0 1053 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ST6GALNAC4Q9H4F1 302 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 SCPEP1Q9HB40 452 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 STMN3Q9NZ72 180 aa7.67□□□□□ -1.18
CDKL5-201ENST00000379989 ERVH48-1M5A8F1 160 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ACOX3O15254 700 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 PMM2O15305 246 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 SLC37A4O43826 429 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 TDP2O95551 362 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 GGPS1O95749 300 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ABHD2P08910 425 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 CDH1P12830 882 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 TBXAS1P24557 533 aaPredicted RBP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 GRIA3P42263 894 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 PRELPP51888 382 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ALDH18A1P54886 795 aaKnown RBP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 EIF3EP60228 445 aaKnown RBP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 STX1BP61266 288 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 NFATC3Q12968 1075 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 STX3Q13277 289 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 UBAP2LQ14157 1087 aaKnown RBP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 DSC3Q14574 896 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 FAM182AQ5T1J6 154 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 FAM122CQ6P4D5 195 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 CENPUQ71F23 418 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 KCTD20Q7Z5Y7 419 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ADAMTSL2Q86TH1 951 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 CARM1Q86X55 608 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 LILRA2Q8N149 483 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 BBOF1Q8ND07 529 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 HM13Q8TCT9 377 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ARHGEF26Q96DR7 871 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ASIC4Q96FT7 647 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 LRGUKQ96M69 825 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 TARS2Q9BW92 718 aaKnown RBP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 XPNPEP1Q9NQW7 623 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 UBA2Q9UBT2 640 aaPredicted RBP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 TCEAL9Q9UHQ7 104 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ARHGAP26Q9UNA1 814 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 UGT2A1Q9Y4X1 527 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 MYMKA6NI61 221 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 E9PMD0 336 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 MEIS1O00470 390 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 SOCS7O14512 581 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 HDAC3O15379 428 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ZBTB7AO95365 584 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 NMT1P30419 496 aaKnown RBP7.66□□□□□ -1.18
CDKL5-201ENST00000379989 PKLRP30613 574 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 ZNF76P36508 570 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 GPD2P43304 727 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 POLD2P49005 469 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 JAK3P52333 1124 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 SLC12A3P55017 1021 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 NME3Q13232 169 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 TTBK2Q6IQ55 1244 aa7.66□□□□□ -1.18
CDKL5-201ENST00000379989 TRIM72Q6ZMU5 477 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms