RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.69■■□□□ 1.06
SKI-201ENST00000378536 CHADO15335 359 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 PIGRP01833 764 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 RBP1P09455 135 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 VCLP18206 1134 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 SEC24CP53992 1094 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 PPIGQ13427 754 aaKnown RBP eCLIP21.69■■□□□ 1.066e-7■■■□□ 16.4
SKI-201ENST00000378536 PDPK2PQ6A1A2 396 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 LRRC8EQ6NSJ5 796 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 B3GNT5Q9BYG0 378 aa21.69■■□□□ 1.06
SKI-201ENST00000378536 PTK2BQ14289 1009 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 BRMS1LQ5PSV4 323 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 ACBD5Q5T8D3 534 aaPredicted RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 SYCE1LA8MT33 242 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 IGFBP4P22692 258 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 LILRA4P59901 499 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 FOXD4Q12950 439 aaPredicted RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 HIC1Q14526 733 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 HIST2H2ACQ16777 129 aaPredicted RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 HIST2H2AA3Q6FI13 130 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 PLEKHA7Q6IQ23 1121 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 LRRC49Q8IUZ0 686 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 ALLCQ8N6M5 410 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 MRPL1Q9BYD6 325 aaKnown RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 CLCA2Q9UQC9 943 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 OR4Q2P0C623 313 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 GP5P40197 560 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 ILF2Q12905 390 aaKnown RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 ARMC12Q5T9G4 340 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 KRT80Q6KB66 452 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 LLGL2Q6P1M3 1020 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 DSG4Q86SJ6 1040 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 PSTKQ8IV42 348 aaKnown RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 ASPSCR1Q9BZE9 553 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 LRRC19Q9H756 370 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 PCDH8O95206 1070 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 SSTR1P30872 391 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 POU5F1Q01860 360 aaKnown RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 FNDC3BQ53EP0 1204 aaKnown RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 SGO1Q5FBB7 561 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 ARMC6Q6NXE6 501 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 RGS9BPQ6ZS82 235 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 ARID3BQ8IVW6 561 aaPredicted RBP21.68■■□□□ 1.06
SKI-201ENST00000378536 TRIM48Q8IWZ4 208 aa21.68■■□□□ 1.06
SKI-201ENST00000378536 OTOP2Q7RTS6 562 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 MAGEB18Q96M61 343 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 STXBP5LQ9Y2K9 1186 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 PDE2AO00408 941 aaPredicted RBP21.67■■□□□ 1.06
SKI-201ENST00000378536 SYN3O14994 580 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 ITGAVP06756 1048 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 FAM153BP0C7A2 387 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 FGFR1P11362 822 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 PSMB4P28070 264 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 FAM153CQ494X1 144 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 STRADAQ7RTN6 431 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 SLC4A11Q8NBS3 891 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 LRRC39Q96DD0 335 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 ERP27Q96DN0 273 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 ACBD6Q9BR61 282 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 NCF1BA6NI72 391 aaPredicted RBP21.67■■□□□ 1.06
SKI-201ENST00000378536 NCF1CA8MVU1 366 aaPredicted RBP21.67■■□□□ 1.06
SKI-201ENST00000378536 FAM107AO95990 144 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 MPOP05164 745 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 NCF1P14598 390 aaPredicted RBP21.67■■□□□ 1.06
SKI-201ENST00000378536 PGM1P36871 562 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 TAF11Q15544 211 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 SHISA4Q96DD7 197 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.67■■□□□ 1.06
SKI-201ENST00000378536 SFMBT1Q9UHJ3 866 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 ETS1P14921 441 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 CSHL1Q14406 222 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 SYNDIG1Q9H7V2 258 aa21.67■■□□□ 1.06
SKI-201ENST00000378536 TBL1XO60907 577 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 CYP2A6P11509 494 aaPredicted RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 SMAD3P84022 425 aaKnown RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 HSP90AA5PQ58FG0 334 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 CCDC124Q96CT7 223 aaKnown RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 CPNE1Q99829 537 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 STK39Q9UEW8 545 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 VAPBO95292 243 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 MZF1P28698 734 aaPredicted RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 PBLDP30039 288 aaPredicted RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 C6orf10Q5SRN2 563 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 PLPP4Q5VZY2 271 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 MON1BQ7L1V2 547 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 HJURPQ8NCD3 748 aaPredicted RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 FAXDC2Q96IV6 333 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 TM9SF1O15321 606 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 SERPINA4P29622 427 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 AP2B1P63010 937 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 FUT10Q6P4F1 479 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 AENQ8WTP8 325 aaKnown RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 ARVCFO00192 962 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 CCND3P30281 292 aaPredicted RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 CDC25CP30307 473 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 POLR2LP62875 67 aaKnown RBP21.66■■□□□ 1.06
SKI-201ENST00000378536 CDK16Q00536 496 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 PHTF1Q9UMS5 762 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 A0A1W2PQH9 124 aa21.66■■□□□ 1.06
SKI-201ENST00000378536 USP12O75317 370 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms