RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 RBP5P82980 135 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 TLR1Q15399 786 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 KLHDC10Q6PID8 442 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 ISLR2Q6UXK2 745 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 ARMCX6Q7L4S7 300 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 DEFB107AQ8IZN7 70 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 GSDMBQ8TAX9 411 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 MIPOL1Q8TD10 442 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 APBB2Q92870 758 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 EBNA1BP2Q99848 306 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 SIKE1Q9BRV8 207 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 MKS1Q9NXB0 559 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 AKT3Q9Y243 479 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 LZTS1Q9Y250 596 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 F5H423 210 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 CASQ2O14958 399 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 ITM2AO43736 263 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC6A3Q01959 620 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 DBN1Q16643 649 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 Q3C1V9 767 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 FASTKD1Q53R41 847 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 MCUQ8NE86 351 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 LRRC39Q96DD0 335 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 CIDEBQ9UHD4 219 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 SSX2IPQ9Y2D8 614 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 LOC100653049A0A140TA62 436 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 GABBR2O75899 941 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 KRT34O76011 436 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 PMLP29590 882 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 ALDH1A3P47895 512 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC26A2P50443 739 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 HPCAP84074 193 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 BTKQ06187 659 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 TBL3Q12788 808 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 ACBD5Q5T8D3 534 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 UNC5BQ8IZJ1 945 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 ZNF778Q96MU6 729 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 MRPL45Q9BRJ2 306 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 DHX35Q9H5Z1 703 aaKnown RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 TXNRD2Q9NNW7 524 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 KIAA1257Q9ULG3 409 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 FAM159BA6NKW6 160 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 DPYSL4O14531 572 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 PAPSS1O43252 624 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 CNMDO75829 334 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 YY1P25490 414 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 MAGEA3P43357 314 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 NADK2Q4G0N4 442 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 GJC2Q5T442 439 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 KLC3Q6P597 504 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 FBXW8Q8N3Y1 598 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 MARVELD2Q8N4S9 558 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 DEPDC1BQ8WUY9 529 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 KIF12Q96FN5 646 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 TBCBQ99426 244 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 LPIN3Q9BQK8 851 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 ZNF670Q9BS34 389 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 NFKBIZQ9BYH8 718 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 CXCL16Q9H2A7 254 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 SF3B1O75533 1304 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 H3BNX3 289 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 DENRO43583 198 aaKnown RBP17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 STRNO43815 780 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 CCDC166P0CW27 439 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 SNAPC2Q13487 334 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 KCNT2Q6UVM3 1135 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 RSPH3Q86UC2 560 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 KBTBD6Q86V97 674 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 ADGRF2Q8IZF7 708 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 LZICQ8WZA0 190 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 CMTM5Q96DZ9 223 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 SLX1AQ9BQ83 275 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 ERAP1Q9NZ08 941 aa17.04■□□□□ 0.32
PCDHA1-201ENST00000378133 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 MDM4O15151 490 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 L1CAMP32004 1257 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC1A6P48664 564 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 HSP90AA5PQ58FG0 334 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 OGFRL1Q5TC84 451 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 CDKL3Q8IVW4 592 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 METTL25Q8N6Q8 603 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 ZFP28Q8NHY6 868 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 CLEC4CQ8WTT0 213 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 Q9H521 79 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 STN1Q9H668 368 aaKnown RBP17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC17A6Q9P2U8 582 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 SNX9Q9Y5X1 595 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 SCN1AP35498 2009 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 BTBD19C9JJ37 291 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 GCATO75600 419 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 ATP6V1B1P15313 513 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 DESP17661 470 aa17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 NCF2P19878 526 aaPredicted RBP17.03■□□□□ 0.32
PCDHA1-201ENST00000378133 ITGAXP20702 1163 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms