RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TNFSF13BQ9Y275 285 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 AK5Q9Y6K8 562 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 COMMD3-BMI1R4GMX3 469 aa18.47■□□□□ 0.55
GNE-201ENST00000377902 PPEF2O14830 753 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 CNTFP26441 200 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.46■□□□□ 0.55
GNE-201ENST00000377902 NDRG1Q92597 394 aaKnown RBP18.46■□□□□ 0.55
GNE-201ENST00000377902 AGAP2Q99490 1192 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 STN1Q9H668 368 aaKnown RBP18.46■□□□□ 0.55
GNE-201ENST00000377902 SNX15Q9NRS6 342 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 DTNAQ9Y4J8 743 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
GNE-201ENST00000377902 PSMB4P28070 264 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 PMLP29590 882 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 HARS2P49590 506 aaKnown RBP18.46■□□□□ 0.55
GNE-201ENST00000377902 NUDT2P50583 147 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 DEUP1Q05D60 604 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 SOWAHAQ2M3V2 549 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 STXBP5Q5T5C0 1151 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 DCLK2Q8N568 766 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 C7orf31Q8N865 590 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 ACVR1CQ8NER5 493 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 ACMSDQ8TDX5 336 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 JADE3Q92613 823 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 CDKL2Q92772 493 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 DCUN1D1Q96GG9 259 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 MPP4Q96JB8 637 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 CYP3A43Q9HB55 503 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 ARHGAP26Q9UNA1 814 aa18.46■□□□□ 0.55
GNE-201ENST00000377902 DPYSL4O14531 572 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 LTFP02788 710 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 PGK2P07205 417 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 FDFT1P37268 417 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 RANBP1P43487 201 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 INHBCP55103 352 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 MRPS22P82650 360 aaKnown RBP18.45■□□□□ 0.54
GNE-201ENST00000377902 SNAPC2Q13487 334 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 TREML2Q5T2D2 321 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 MICALL2Q8IY33 904 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 NME8Q8N427 588 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 OPTNQ96CV9 577 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 CCDC28BQ9BUN5 200 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 HOXC10Q9NYD6 342 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 SSX2IPQ9Y2D8 614 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 SLC4A7Q9Y6M7 1214 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 A0A087WZ62 844 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.45■□□□□ 0.54
GNE-201ENST00000377902 HSPA4LO95757 839 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 CHRNGP07510 517 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 LCP1P13796 627 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 ATP6V1B1P15313 513 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 ALOX15P16050 662 aaPredicted RBP18.45■□□□□ 0.54
GNE-201ENST00000377902 GRK2P25098 689 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 PKNOX1P55347 436 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 INCA1Q0VD86 236 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 TMEM132DQ14C87 1099 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 DPYSL2Q16555 572 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 EPGNQ6UW88 154 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 METTL25Q8N6Q8 603 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 C12orf42Q96LP6 360 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 AGAP3Q96P47 875 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 TBCBQ99426 244 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 FDXACB1Q9BRP7 624 aaPredicted RBP18.45■□□□□ 0.54
GNE-201ENST00000377902 DPEP3Q9H4B8 488 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 DPP3Q9NY33 737 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 TXNDC16Q9P2K2 825 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 RPS6KL1Q9Y6S9 549 aa18.45■□□□□ 0.54
GNE-201ENST00000377902 SYNJ2BP-COX16A0A087WUM0 186 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 A0A0A0MRY4 1105 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 CASQ2O14958 399 aaPredicted RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 MFSD11O43934 449 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 FBXO21O94952 628 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 PIM1P11309 404 aaPredicted RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 PDCD2Q16342 344 aaPredicted RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 OGFRL1Q5TC84 451 aaPredicted RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 RBM44Q6ZP01 1051 aaKnown RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 FAM131BQ86XD5 332 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 DRAXINQ8NBI3 349 aaPredicted RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 SLC35F5Q8WV83 523 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 USP13Q92995 863 aaPredicted RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 SPATA13Q96N96 652 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 GCOM2Q9BZD3 368 aaPredicted RBP18.44■□□□□ 0.54
GNE-201ENST00000377902 CDH19Q9H159 772 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 COX16Q9P0S2 106 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 STX16-NPEPL1H3BU86 382 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 RNF103O00237 685 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 VILLO15195 856 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 DNAJA2O60884 412 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 TFAP2AP05549 437 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 P4HA1P13674 534 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 ITGA7Q13683 1181 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 PKDCCQ504Y2 493 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 LRRC8BQ6P9F7 803 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 PQLC1Q8N2U9 271 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 MARK4Q96L34 752 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 CNBD2Q96M20 576 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 SLC4A5Q9BY07 1137 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 PDZD7Q9H5P4 517 aa18.44■□□□□ 0.54
GNE-201ENST00000377902 GGA3Q9NZ52 723 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms