RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PSEN1P49768 467 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 SKOR1P84550 965 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 KRT33BQ14525 404 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TMA16Q96EY4 203 aaKnown RBP14.85□□□□□ -0.03
TCOF1-202ENST00000377797 ZBTB18Q99592 522 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 ACBD6Q9BR61 282 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 PDLIM7Q9NR12 457 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TM9SF1O15321 606 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 PTPN9P43378 593 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 RETSATQ6NUM9 610 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 KCNMB4Q86W47 210 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 FAM167BQ9BTA0 163 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TTPALQ9BTX7 342 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 EFHD1Q9BUP0 239 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 MRPL17Q9NRX2 175 aaKnown RBP14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TMEM51Q9NW97 253 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 CRLS1Q9UJA2 301 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 ERI2A8K979 691 aaKnown RBP14.85□□□□□ -0.03
TCOF1-202ENST00000377797 APOA4P06727 396 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 NFKB1P19838 968 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TIGD5Q53EQ6 642 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 SPPL2BQ8TCT7 592 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 CCDC124Q96CT7 223 aaKnown RBP14.85□□□□□ -0.03
TCOF1-202ENST00000377797 IGKV6-21A0A0C4DH24 114 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TLR5O60602 858 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 ZNF618Q5T7W0 954 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 AGAP9Q5VTM2 703 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TTC23LQ6PF05 361 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 TTC30AQ86WT1 665 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 MCRS1Q96EZ8 462 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 P2RY11Q96G91 374 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 UXTQ9UBK9 157 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-202ENST00000377797 GABRQQ9UN88 632 aa14.85□□□□□ -0.03
TCOF1-202ENST00000377797 RUVBL2Q9Y230 463 aaKnown RBP14.85□□□□□ -0.03
TCOF1-202ENST00000377797 MYH8P13535 1937 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 TRDMT1O14717 391 aaKnown RBP14.84□□□□□ -0.03
TCOF1-202ENST00000377797 WARSP23381 471 aaKnown RBP14.84□□□□□ -0.03
TCOF1-202ENST00000377797 USP6NLQ92738 828 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 DRC3Q9H069 523 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 MSI1O43347 362 aaKnown RBP14.84□□□□□ -0.03
TCOF1-202ENST00000377797 CRTAMO95727 393 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 BGNP21810 368 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 MMP13P45452 471 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 HDAC4P56524 1084 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 CUL3Q13618 768 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 SH3PXD2AQ5TCZ1 1133 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 VSTM1Q6UX27 236 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 BCO2Q9BYV7 579 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 VPS9D1Q9Y2B5 631 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 THSD7AQ9UPZ6 1657 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 MAST2Q6P0Q8 1798 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 ALOX15BO15296 676 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 CSH1P0DML2 217 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 CSH2P0DML3 217 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 CCNB1P14635 433 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 WEE1P30291 646 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 RGS4P49798 205 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 RBBP7Q16576 425 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 NLRP9Q7RTR0 991 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 LRRC43Q8N309 656 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 KIF2BQ8N4N8 673 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 SHCBP1LQ9BZQ2 653 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 SUPT3HB4E1H0 165 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 AVILO75366 819 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 SUPT3HO75486 399 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 PGM1P36871 562 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 RABGGTBP53611 331 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 XRCC4Q13426 336 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 EFTUD2Q15029 972 aaKnown RBP eCLIP14.84□□□□□ -0.032e-6■■■■■ 57.6
TCOF1-202ENST00000377797 SPANXN3Q5MJ09 141 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 CLEC4CQ8WTT0 213 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 SRPK1Q96SB4 655 aaKnown RBP14.84□□□□□ -0.03
TCOF1-202ENST00000377797 CYLDQ9NQC7 956 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 ADA2Q9NZK5 511 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 DNMT3LQ9UJW3 386 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 ADAM28Q9UKQ2 775 aa14.84□□□□□ -0.03
TCOF1-202ENST00000377797 SRP72O76094 671 aaKnown RBP14.83□□□□□ -0.03
TCOF1-202ENST00000377797 CCND3P30281 292 aaPredicted RBP14.83□□□□□ -0.03
TCOF1-202ENST00000377797 SLC5A3P53794 718 aa14.83□□□□□ -0.03
TCOF1-202ENST00000377797 PABPC1LQ4VXU2 614 aaKnown RBP14.83□□□□□ -0.03
TCOF1-202ENST00000377797 DDX1Q92499 740 aaKnown RBP14.83□□□□□ -0.03
TCOF1-202ENST00000377797 ADGRE3Q9BY15 652 aa14.83□□□□□ -0.03
TCOF1-202ENST00000377797 ZYG11BQ9C0D3 744 aa14.83□□□□□ -0.03
TCOF1-202ENST00000377797 UPF3AQ9H1J1 476 aaKnown RBP14.83□□□□□ -0.03
TCOF1-202ENST00000377797 HEY2Q9UBP5 337 aa14.83□□□□□ -0.03
TCOF1-202ENST00000377797 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.83□□□□□ -0.03
TCOF1-202ENST00000377797 MYH4Q9Y623 1939 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 MDM4O15151 490 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 HIST1H2AGP0C0S8 130 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ERVK-10P10266 1014 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 CPA3P15088 417 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 HIST1H2ADP20671 130 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ERFP50548 548 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 TAF10Q12962 218 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 BRMS1LQ5PSV4 323 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 C16orf59Q7L2K0 433 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 HIST1H2AHQ96KK5 128 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 HIST1H2AJQ99878 128 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 H2AFJQ9BTM1 129 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 PRKD2Q9BZL6 878 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms