RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
HDAC6-204ENST00000376643 LRRC72A6NJI9 287 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 PPP1R3GB7ZBB8 358 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 F5H5T6 163 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 PIK3R2O00459 728 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 FSBPO95073 299 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 LUC7L3O95232 432 aaKnown RBP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 GLI1P08151 1106 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 SLC6A4P31645 630 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 CD70P32970 193 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 ACSL1P33121 698 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 CSKP41240 450 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 CCT8P50990 548 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 YWHAZP63104 245 aaKnown RBP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 ISM2Q6H9L7 571 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 SCUBE3Q8IX30 993 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 CARNMT1Q8N4J0 409 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 KAT5Q92993 513 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 SLC39A13Q96H72 371 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 ACE2Q9BYF1 805 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 PABPC3Q9H361 631 aaKnown RBP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 THAP9Q9H5L6 903 aa15.28■□□□□ 0.04
HDAC6-204ENST00000376643 C6orf106Q9H6K1 298 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC6-204ENST00000376643 EDDM13A0A1B0GTR0 161 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 YKT6O15498 198 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 THAP12O43422 761 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 TOP3BO95985 862 aaKnown RBP15.27■□□□□ 0.04
HDAC6-204ENST00000376643 ADH1BP00325 375 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 ABCB4P21439 1286 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 GNA15P30679 374 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 GRK6P43250 576 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 C21orf59P57076 290 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
HDAC6-204ENST00000376643 SLC45A4Q5BKX6 768 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 RABGAP1LQ5R372 815 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 KIAA0895LQ68EN5 471 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 DSG4Q86SJ6 1040 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 TMEM110Q86TL2 294 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 TAC4Q86UU9 113 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 CHSY1Q86X52 802 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 ARHGEF19Q8IW93 802 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 GALNT15Q8N3T1 639 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 CHCHD4Q8N4Q1 142 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 C1orf216Q8TAB5 229 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 RHBDD1Q8TEB9 315 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 CLEC4CQ8WTT0 213 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 BIRC7Q96CA5 298 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 PRICKLE1Q96MT3 831 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-204ENST00000376643 OMDQ99983 421 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 ZSWIM1Q9BR11 485 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 SRRTQ9BXP5 876 aaKnown RBP15.27■□□□□ 0.04
HDAC6-204ENST00000376643 SLC4A5Q9BY07 1137 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 TM9SF3Q9HD45 589 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 UBE2TQ9NPD8 197 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-204ENST00000376643 ASNSD1Q9NWL6 643 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 FBXL12Q9NXK8 326 aa15.27■□□□□ 0.04
HDAC6-204ENST00000376643 ITIH6Q6UXX5 1313 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 ADAMTS9Q9P2N4 1935 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 GOLGA6L7A0A1B0GV03 622 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 A0A1B0GVT2 93 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 GTPBP10A4D1E9 387 aaKnown RBP15.26■□□□□ 0.03
HDAC6-204ENST00000376643 PCDHGA12O60330 932 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 CBFA2T3O75081 653 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 LETM1O95202 739 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-204ENST00000376643 MOCS2O96007 188 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-204ENST00000376643 CCR1P32246 355 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 NUDT1P36639 197 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 CSNK1EP49674 416 aaKnown RBP15.26■□□□□ 0.03
HDAC6-204ENST00000376643 SGSHP51688 502 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 RPS24P62847 133 aaKnown RBP15.26■□□□□ 0.03
HDAC6-204ENST00000376643 FAM193AP78312 1265 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 CDK17Q00537 523 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 ECT2LQ008S8 904 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 CST6Q15828 149 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 PITRM1Q5JRX3 1037 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 EFHC1Q5JVL4 640 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 NADSYN1Q6IA69 706 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 DBX2Q6ZNG2 339 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 LGI2Q8N0V4 545 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 ZNF366Q8N895 744 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 OR2T34Q8NGX1 318 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 ZNF606Q8WXB4 792 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 KREMEN1Q96MU8 473 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 CAMK1GQ96NX5 476 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 NUCKS1Q9H1E3 243 aaKnown RBP15.26■□□□□ 0.03
HDAC6-204ENST00000376643 ERVW-1Q9UQF0 538 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 NAALADL1Q9UQQ1 740 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 ANKRD6Q9Y2G4 727 aa15.26■□□□□ 0.03
HDAC6-204ENST00000376643 FNDC3AQ9Y2H6 1198 aaKnown RBP15.26■□□□□ 0.03
HDAC6-204ENST00000376643 A0A1B0GVM2 712 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 TCAF2A6NFQ2 919 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 SRRM3A6NNA2 597 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-204ENST00000376643 HSF2BPO75031 334 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 GABBR2O75899 941 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 TRUB2O95900 331 aaKnown RBP15.25■□□□□ 0.03
HDAC6-204ENST00000376643 FYNP06241 537 aa15.25■□□□□ 0.03
HDAC6-204ENST00000376643 CDK4P11802 303 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms