RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	SHCBP1L	Q9BZQ2	653 aa		13.91	□□□□□ -0.18
DDR1-225	ENST00000376568	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.91	□□□□□ -0.18
DDR1-225	ENST00000376568	TPX2	Q9ULW0	747 aa	Known RBP	13.91	□□□□□ -0.18
DDR1-225	ENST00000376568	CUL9	Q8IWT3	2517 aa		13.91	□□□□□ -0.18
DDR1-225	ENST00000376568	ANKRD65	E5RJM6	399 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	SYN3	O14994	580 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	EFCAB14	O75071	495 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	MXRA7	P84157	204 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	BMPR2	Q13873	1038 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	HABP4	Q5JVS0	413 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	LGSN	Q5TDP6	509 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	RFX8	Q6ZV50	586 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	BBOF1	Q8ND07	529 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	SLC35F5	Q8WV83	523 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	ZDHHC6	Q9H6R6	413 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	SYNDIG1	Q9H7V2	258 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	C2CD4B	A6NLJ0	364 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	MYBL2	P10244	700 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	KIT	P10721	976 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	PBLD	P30039	288 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	RPL21	P46778	160 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	TRIM68	Q6AZZ1	485 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	NXN	Q6DKJ4	435 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	GSTCD	Q8NEC7	633 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	SH3RF2	Q8TEC5	729 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	CASD1	Q96PB1	797 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	RNF157	Q96PX1	679 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	DDX50	Q9BQ39	737 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	BCO2	Q9BYV7	579 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	DCLK3	Q9C098	648 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	TLK1	Q9UKI8	766 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	ASCC3	Q8N3C0	2202 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568		H0YGN5	161 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	ABLIM1	O14639	778 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	PJA2	O43164	708 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	MFSD11	O43934	449 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	TBC1D4	O60343	1298 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	PARN	O95453	639 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	GNGT1	P63211	74 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	FOXD4	Q12950	439 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	ITPRIPL1	Q6GPH6	555 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	CDC26	Q8NHZ8	85 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	HTR3C	Q8WXA8	447 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	DDX1	Q92499	740 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	ATP6V1E2	Q96A05	226 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	KCTD15	Q96SI1	283 aa	Predicted RBP	13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	EBF3	Q9H4W6	596 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	BDP1	A6H8Y1	2624 aa		13.9	□□□□□ -0.18
DDR1-225	ENST00000376568	FOXO6	A8MYZ6	492 aa		13.9	□□□□□ -0.19
DDR1-225	ENST00000376568	TUBB	P07437	444 aa		13.9	□□□□□ -0.19
DDR1-225	ENST00000376568	KIAA0319	Q5VV43	1072 aa		13.9	□□□□□ -0.19
DDR1-225	ENST00000376568	CRYBG2	Q8N1P7	616 aa		13.9	□□□□□ -0.19
DDR1-225	ENST00000376568	CCNYL1	Q8N7R7	359 aa		13.9	□□□□□ -0.19
DDR1-225	ENST00000376568	TGS1	Q96RS0	853 aa	Known RBP	13.9	□□□□□ -0.19
DDR1-225	ENST00000376568	NDUFAB1	O14561	156 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	TGM5	O43548	720 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	IL1B	P01584	269 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	SOD2	P04179	222 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	CD86	P42081	329 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	FNDC3B	Q53EP0	1204 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	SERPINA13P	Q6UXR4	307 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	C15orf39	Q6ZRI6	1047 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	PRR23C	Q6ZRP0	262 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	MARK2	Q7KZI7	788 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	CSPG4P5	Q96PW8	444 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	LHX5	Q9H2C1	402 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	DONSON	Q9NYP3	566 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	HACD3	Q9P035	362 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	CNTN5	O94779	1100 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	MT-CYB	P00156	380 aa	Predicted RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	EZR	P15311	586 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	CD72	P21854	359 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	MAGEA4	P43358	317 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	HDAC4	P56524	1084 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	AUH	Q13825	339 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	PDK2	Q15119	407 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	ASTE1	Q2TB18	679 aa	Predicted RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	OR52K1	Q8NGK4	314 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	RILP	Q96NA2	401 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	SEMA3C	Q99985	751 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	UTP6	Q9NYH9	597 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	FAM72C	H0Y354	149 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	TUBB4B	P68371	445 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	FAM72A	Q5TYM5	149 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	FAM72D	Q6L9T8	149 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	FAM72B	Q86X60	149 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	FBXO36	Q8NEA4	188 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	SMC6	Q96SB8	1091 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	PCDHGC4	Q9Y5F7	938 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	INSL5	Q9Y5Q6	135 aa		13.89	□□□□□ -0.19
DDR1-225	ENST00000376568	DOCK1	Q14185	1865 aa		13.88	□□□□□ -0.19
DDR1-225	ENST00000376568		A0A0A6YYK5	440 aa	Predicted RBP	13.88	□□□□□ -0.19
DDR1-225	ENST00000376568	GIPC1	O14908	333 aa		13.88	□□□□□ -0.19
DDR1-225	ENST00000376568	DNAJC6	O75061	913 aa		13.88	□□□□□ -0.19
DDR1-225	ENST00000376568	NFKB1	P19838	968 aa		13.88	□□□□□ -0.19
DDR1-225	ENST00000376568	LRPAP1	P30533	357 aa		13.88	□□□□□ -0.19
DDR1-225	ENST00000376568	GLRB	P48167	497 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms