RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CYP2C9P11712 490 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 EEF1B2P24534 225 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ETFBP38117 255 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TKTL1P51854 596 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 AQP4P55087 323 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PPM1LQ5SGD2 360 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RARS2Q5T160 578 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF618Q5T7W0 954 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DRICH1Q6PGQ1 229 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TTC30AQ86WT1 665 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DNERQ8NFT8 737 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 OR6Y1Q8NGX8 325 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RNF139Q8WU17 664 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TEPSINQ96N21 525 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 GCOM2Q9BZD3 368 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 C20orf27Q9GZN8 174 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 POPDC2Q9HBU9 364 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CHRAC1Q9NRG0 131 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MYH9P35579 1960 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NFASCO94856 1347 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CCL22O00626 93 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CXCR3P49682 368 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 IRF9Q00978 393 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 IL1RL1Q01638 556 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CAND1Q86VP6 1230 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DDIASQ8IXT1 998 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 OR6J1Q8NGC5 347 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 WDR83Q9BRX9 315 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 COG4Q9H9E3 785 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SNX15Q9NRS6 342 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CDY2AQ9Y6F7 541 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CDY1Q9Y6F8 540 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TM7SF2O76062 418 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 USP17L7P0C7H9 530 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PMLP29590 882 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 GP5P40197 560 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CDC16Q13042 620 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SOWAHAQ2M3V2 549 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KCTD4Q8WVF5 259 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RCN3Q96D15 328 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LENG8Q96PV6 779 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SARS2Q9NP81 518 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DCDC2Q9UHG0 476 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SMAPO00193 183 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 AKAP10O43572 662 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CCNA1P78396 465 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NSUN2Q08J23 767 aaKnown RBP eCLIP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 FBXO47Q5MNV8 452 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CELF3Q5SZQ8 465 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RPS27LQ71UM5 84 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 EXOC8Q8IYI6 725 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DNAJB3Q8WWF6 145 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KLRG1Q96E93 195 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SLC10A4Q96EP9 437 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NDNQ99608 321 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LGALS2P05162 132 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 IQCF3P0C7M6 154 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CCNFP41002 786 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ABCE1P61221 599 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ARL13BQ3SXY8 428 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SEL1L3Q68CR1 1132 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DHDDSQ86SQ9 333 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PDCD6IPQ8WUM4 868 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CERS2Q96G23 380 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KCTD15Q96SI1 283 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 EIF2AQ9BY44 585 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DTLQ9NZJ0 730 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PCDHGC3Q9UN70 934 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NOD1Q9Y239 953 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 UBA6A0AVT1 1052 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MAGEB2O15479 319 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 WFS1O76024 890 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 STBD1O95210 358 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 HDAC4P56524 1084 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 R3HDM1Q15032 1099 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF398Q8TD17 642 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LENG1Q96BZ8 264 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MPP4Q96JB8 637 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NPAS2Q99743 824 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NMRAL1Q9HBL8 299 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KRT82Q9NSB4 513 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PDP2Q9P2J9 529 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TNFSF13BQ9Y275 285 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LRRC42Q9Y546 428 aa14.72□□□□□ -0.05
TNFRSF1B-201ENST00000376259 A0A0A0MRY4 1105 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CASTOR2A6NHX0 329 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 C3orf70A6NLC5 250 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PDAP1Q13442 181 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF772Q68DY9 489 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 AMIGO2Q86SJ2 522 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KCNMB4Q86W47 210 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KBTBD2Q8IY47 623 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PQLC3Q8N755 202 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PDZD8Q8NEN9 1154 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SPATA13Q96N96 652 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 B4GALT4O60513 344 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TRIM13O60858 407 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RFPL1O75677 317 aa14.71□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SUPT7LO94864 414 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms