RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PACSIN3Q9UKS6 424 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 A0A1B0GTW7 788 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 ASS1P00966 412 aaKnown RBP13.27□□□□□ -0.28
MSH5-204ENST00000375755 STAG3L1P0CL83 205 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 CDH2P19022 906 aaPredicted RBP13.27□□□□□ -0.28
MSH5-204ENST00000375755 CTGFP29279 349 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 FKBP1BP68106 108 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 BEX3Q00994 111 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 TNFAIP2Q03169 654 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 MPP3Q13368 585 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 LPIN1Q14693 890 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 MFSD4BQ5TF39 518 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 DCUN1D2Q6PH85 259 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 MAVSQ7Z434 540 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 ALDH16A1Q8IZ83 802 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 C2orf40Q9H1Z8 148 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 SMYD2Q9NRG4 433 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 THAP1Q9NVV9 213 aa13.27□□□□□ -0.28
MSH5-204ENST00000375755 DDX56Q9NY93 547 aaKnown RBP13.27□□□□□ -0.28
MSH5-204ENST00000375755 GAS2O43903 313 aaKnown RBP13.27□□□□□ -0.29
MSH5-204ENST00000375755 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 JADE1Q6IE81 842 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 FRMD7Q6ZUT3 714 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 RNF168Q8IYW5 571 aaPredicted RBP13.27□□□□□ -0.29
MSH5-204ENST00000375755 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 ABHD16BQ9H3Z7 469 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 Q9H521 79 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 SIX4Q9UIU6 781 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 RAB26Q9ULW5 256 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 PSMD13Q9UNM6 376 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 APOBEC2Q9Y235 224 aaKnown RBP13.27□□□□□ -0.29
MSH5-204ENST00000375755 ZNF711Q9Y462 761 aa13.27□□□□□ -0.29
MSH5-204ENST00000375755 TCRBV5S1A1TA0A578 114 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 TAF1CQ15572 869 aaPredicted RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 DUOXA2Q1HG44 320 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 C6orf52Q5T4I8 152 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 DNAJC24Q6P3W2 148 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 BORAQ6PGQ7 559 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 AMIGO2Q86SJ2 522 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 WDR75Q8IWA0 830 aaKnown RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 NDUFAF2Q8N183 169 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 EMID1Q96A84 441 aaPredicted RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 SIKE1Q9BRV8 207 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 LIN28AQ9H9Z2 209 aaKnown RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 PLAC1Q9HBJ0 212 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 FBXO21O94952 628 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 HDAC4P56524 1084 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 TEDDM1Q5T9Z0 273 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 BBS12Q6ZW61 710 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 RAB3IL1Q8TBN0 382 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 PIWIL2Q8TC59 973 aaKnown RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 TFAP2BQ92481 460 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 PNPLA8Q9NP80 782 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 CISHQ9NSE2 258 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 HMGXB4Q9UGU5 601 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 HES2Q9Y543 173 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 ASPAP45381 313 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 CD97P48960 835 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 MTTPP55157 894 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 CDKL1Q00532 357 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 ACAP1Q15027 740 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 USP41Q3LFD5 358 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 MORN1Q5T089 497 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 PHTF2Q8N3S3 785 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 UBR7Q8N806 425 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 C1orf127Q8N9H9 656 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 ZNF606Q8WXB4 792 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 SDCBP2Q9H190 292 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 PCDH18Q9HCL0 1135 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 INIPQ9NRY2 104 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 FAIMQ9NVQ4 179 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 MKS1Q9NXB0 559 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 C6orf203Q9P0P8 240 aaPredicted RBP13.26□□□□□ -0.29
MSH5-204ENST00000375755 TJP2Q9UDY2 1190 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 TUBGCP4Q9UGJ1 667 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 ZNF180Q9UJW8 692 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 TNFSF13BQ9Y275 285 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 AK5Q9Y6K8 562 aa13.26□□□□□ -0.29
MSH5-204ENST00000375755 HMX2A2RU54 273 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 UNCXA6NJT0 531 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 E9PBE3 544 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 BIRC5O15392 142 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 SPAG6O75602 509 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 GSRP00390 522 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 ITGB3P05106 788 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 CSH1P0DML2 217 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 CSH2P0DML3 217 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 IL1R2P27930 398 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 PHKA2P46019 1235 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 IDH3AP50213 366 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 NR1H2P55055 460 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 EIF3EP60228 445 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 ENPEPQ07075 957 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 TRPC3Q13507 836 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 SLC10A6Q3KNW5 377 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 SLC44A4Q53GD3 710 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms