RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GP5P40197 560 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 GARSP41250 739 aaKnown RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 ABCE1P61221 599 aaKnown RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 ZNF618Q5T7W0 954 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 GRTP1Q5TC63 336 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 FASTKD5Q7L8L6 764 aaKnown RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 MAVSQ7Z434 540 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 EGFL6Q8IUX8 553 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 ZNF567Q8N184 647 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 DNAJC28Q9NX36 388 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 PPM1HQ9ULR3 514 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 PAPPA2Q9BXP8 1791 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 CITO14578 2027 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 E2F8A0AVK6 867 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 MX2P20592 715 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 AKAP5P24588 427 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 COPAP53621 1224 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 CACNA2D1P54289 1103 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 DSG1Q02413 1049 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 RALGPS1Q5JS13 557 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 RNF220Q5VTB9 566 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 ALKAL1Q6UXT8 129 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 IZUMO2Q6UXV1 221 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 PSTKQ8IV42 348 aaKnown RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 ZNF483Q8TF39 744 aaPredicted RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 CERS2Q96G23 380 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 TSC22D3Q99576 134 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 FAM49AQ9H0Q0 323 aaPredicted RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 ZNF358Q9NW07 568 aa14.93□□□□□ -0.02
MSH5-201ENST00000375703 DDX43Q9NXZ2 648 aaKnown RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 UBQLN1Q9UMX0 589 aaKnown RBP14.93□□□□□ -0.02
MSH5-201ENST00000375703 DDNO94850 711 aaPredicted RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 CPA3P15088 417 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 NCF2P19878 526 aaPredicted RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 GMPRP36959 345 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 PITX1P78337 314 aaPredicted RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 PPIL2Q13356 520 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 ITGA9Q13797 1035 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 SPANXN3Q5MJ09 141 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 VWA5B1Q5TIE3 1220 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 AAGABQ6PD74 315 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 PIGZQ86VD9 579 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 SHKBP1Q8TBC3 707 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 FCRL3Q96P31 734 aaPredicted RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 CPNE1Q99829 537 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 CDHR5Q9HBB8 845 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 VTA1Q9NP79 307 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 SETD4Q9NVD3 440 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 GJD2Q9UKL4 321 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 PIRO00625 290 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 PPP1R12AO14974 1030 aaPredicted RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 SPTLC1O15269 473 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 RECQL4O94761 1208 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 USP1O94782 785 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 MYL4P12829 197 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 ARRB2P32121 409 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 ADIGQ0VDE8 80 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 GSTA3Q16772 222 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 ZNF792Q3KQV3 632 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 PDPK2PQ6A1A2 396 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 NOTUMQ6P988 496 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 APPL2Q8NEU8 664 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 EMID1Q96A84 441 aaPredicted RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 OPTNQ96CV9 577 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 ECSITQ9BQ95 431 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 DNAI2Q9GZS0 605 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 ADAMTS10Q9H324 1103 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 NXF3Q9H4D5 531 aaKnown RBP14.92□□□□□ -0.02
MSH5-201ENST00000375703 SNX15Q9NRS6 342 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 ASB3Q9Y575 518 aa14.92□□□□□ -0.02
MSH5-201ENST00000375703 M0QYT0 321 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 CD4P01730 458 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 CRABP2P29373 138 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 HARS2P49590 506 aaKnown RBP14.91□□□□□ -0.02
MSH5-201ENST00000375703 OLIG2Q13516 323 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 CCDC153Q494R4 210 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 CMC1Q7Z7K0 106 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 DCLK2Q8N568 766 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 OR52K1Q8NGK4 314 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 CMTM5Q96DZ9 223 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 AGAP3Q96P47 875 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 NR1H4Q96RI1 486 aaPredicted RBP14.91□□□□□ -0.02
MSH5-201ENST00000375703 SHCBP1LQ9BZQ2 653 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 S100A14Q9HCY8 104 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 ADARB2Q9NS39 739 aaKnown RBP14.91□□□□□ -0.02
MSH5-201ENST00000375703 SPATS2LQ9NUQ6 558 aaKnown RBP14.91□□□□□ -0.02
MSH5-201ENST00000375703 KLK14Q9P0G3 267 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 IGSF9Q9P2J2 1179 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 LOC100653049A0A140TA62 436 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 KCNK1O00180 336 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 ZNF195O14628 629 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 XPO1O14980 1071 aaKnown RBP14.91□□□□□ -0.02
MSH5-201ENST00000375703 ADCY6O43306 1168 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 KRT34O76011 436 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 NOS2P35228 1153 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 SPRP35270 261 aaPredicted RBP14.91□□□□□ -0.02
MSH5-201ENST00000375703 EPHB1P54762 984 aa14.91□□□□□ -0.02
MSH5-201ENST00000375703 SATB1Q01826 763 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms