RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 VARS2Q5ST30 1063 aaKnown RBP16.02■□□□□ 0.16
CCDC40-202ENST00000374876 SYCP2LQ5T4T6 812 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 SLC9A4Q6AI14 798 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 CGB2Q6NT52 195 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 CYB5D1Q6P9G0 228 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 RSPO2Q6UXX9 243 aaPredicted RBP16.02■□□□□ 0.16
CCDC40-202ENST00000374876 EP400NLQ6ZTU2 488 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 ANKRD52Q8NB46 1076 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 LRRC8CQ8TDW0 803 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 ZNF560Q96MR9 790 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 SNX25Q9H3E2 840 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 PCDHB8Q9UN66 801 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 IKBKGQ9Y6K9 419 aa16.02■□□□□ 0.16
CCDC40-202ENST00000374876 SYN3O14994 580 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 ADAM12O43184 909 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 HCRTO43612 131 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 CLASP2O75122 1294 aaKnown RBP16.02■□□□□ 0.15
CCDC40-202ENST00000374876 GABBR2O75899 941 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 ZWINTO95229 277 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 RBL1P28749 1068 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 PNPLA4P41247 253 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 PTPN9P43378 593 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 SEPT7Q16181 437 aaKnown RBP16.02■□□□□ 0.15
CCDC40-202ENST00000374876 RGS9BPQ6ZS82 235 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 IGDCC3Q8IVU1 814 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 CCDC63Q8NA47 563 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 RTP4Q96DX8 246 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 CLSTN3Q9BQT9 956 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 FRMD8Q9BZ67 464 aaPredicted RBP16.02■□□□□ 0.15
CCDC40-202ENST00000374876 KLC2Q9H0B6 622 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 RXFP1Q9HBX9 757 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 SSX2IPQ9Y2D8 614 aa16.02■□□□□ 0.15
CCDC40-202ENST00000374876 BCLAF3A2AJT9 711 aaKnown RBP16.01■□□□□ 0.15
CCDC40-202ENST00000374876 SPAG6O75602 509 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 LCP1P13796 627 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 YWHAGP61981 247 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC40-202ENST00000374876 SLC1A5Q15758 541 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 WSCD1Q658N2 575 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 SLC26A9Q7LBE3 791 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 CRYBG2Q8N1P7 616 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 APPL2Q8NEU8 664 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 CLEC4CQ8WTT0 213 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 DCAKDQ8WVC6 231 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 KBTBD7Q8WVZ9 684 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 PPP2R3CQ969Q6 453 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 EMILIN2Q9BXX0 1053 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 PRDM6Q9NQX0 595 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 GRID1Q9ULK0 1009 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 PHTF1Q9UMS5 762 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 STARD13Q9Y3M8 1113 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 TEX264Q9Y6I9 313 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 ZNF487B1APH4 448 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 MAP3K6O95382 1288 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 SPATA31D3P0C874 917 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 TFE3P19532 575 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-202ENST00000374876 CYP2F1P24903 491 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 LMO2P25791 158 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 MNAT1P51948 309 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 MRPL58Q14197 206 aaKnown RBP16.01■□□□□ 0.15
CCDC40-202ENST00000374876 DUSP6Q16828 381 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 GALNTL6Q49A17 601 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 RNF43Q68DV7 783 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 LVRNQ6Q4G3 990 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 SPATA31D4Q6ZUB0 917 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 CDKL3Q8IVW4 592 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-202ENST00000374876 PARP9Q8IXQ6 854 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 VN1R2Q8NFZ6 395 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 ALKBH8Q96BT7 664 aaKnown RBP16.01■□□□□ 0.15
CCDC40-202ENST00000374876 DHX35Q9H5Z1 703 aaKnown RBP16.01■□□□□ 0.15
CCDC40-202ENST00000374876 CDY1Q9Y6F8 540 aa16.01■□□□□ 0.15
CCDC40-202ENST00000374876 IQANK1A0A1B0GTG1 560 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 TCRBV9S1A1TA0A576 114 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 CFAP73A6NFT4 308 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 AVILO75366 819 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 ODC1P11926 461 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 ZFXP17010 805 aaPredicted RBP16■□□□□ 0.15
CCDC40-202ENST00000374876 OR1D2P34982 312 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 SCNN1AP37088 669 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 ACADSBP45954 432 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 ARPP19P56211 112 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 YWHAHQ04917 246 aaPredicted RBP16■□□□□ 0.15
CCDC40-202ENST00000374876 DPYSL2Q16555 572 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 CTXN3Q4LDR2 81 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 ANKS3Q6ZW76 656 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 FITM2Q8N6M3 262 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 SLC2A14Q8TDB8 520 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 SPOCK2Q92563 424 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 RMDN2Q96LZ7 410 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 ECT2Q9H8V3 914 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 CYLDQ9NQC7 956 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 GDAP2Q9NXN4 497 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 CLDND1Q9NY35 253 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 MTRRQ9UBK8 725 aa16■□□□□ 0.15
CCDC40-202ENST00000374876 HUS1O60921 280 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 MT-ND3P03897 115 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 APRTP07741 180 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 INHBAP08476 426 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 L1CAMP32004 1257 aa15.99■□□□□ 0.15
CCDC40-202ENST00000374876 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-202ENST00000374876 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms