RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 EDEM1Q92611 657 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 POMKQ9H5K3 350 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 COG4Q9H9E3 785 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 RRN3Q9NYV6 651 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 C17orf102A2RUQ5 167 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 CHRNB3Q05901 458 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 BLMHQ13867 455 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 VAT1Q99536 393 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 THUMPD3Q9BV44 507 aaKnown RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 C12orf65Q9H3J6 166 aaKnown RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 DDX43Q9NXZ2 648 aaKnown RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 MYH8P13535 1937 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 TRPC1P48995 793 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 PRMT9Q6P2P2 845 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 RINLQ6ZS11 566 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 ADAM32Q8TC27 787 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 UMODL1Q5DID0 1318 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 NCF1BA6NI72 391 aaPredicted RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 NCF1CA8MVU1 366 aaPredicted RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 TCEA3O75764 348 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 HIST1H2AGP0C0S8 130 aaPredicted RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 NCF1P14598 390 aaPredicted RBP17.78■□□□□ 0.44
PTPRU-202ENST00000373779 HIST1H2ADP20671 130 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 AKAP5P24588 427 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 NEK2P51955 445 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 C10orf120Q5SQS8 335 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 C6orf89Q6UWU4 347 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 CYP2R1Q6VVX0 501 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 SLCO2A1Q92959 643 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 HIST1H2AHQ96KK5 128 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 DACH2Q96NX9 599 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 HIST1H2AJQ99878 128 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 TBL1YQ9BQ87 522 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 H2AFJQ9BTM1 129 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 PRKD2Q9BZL6 878 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 PCDHGB4Q9UN71 923 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 C5P01031 1676 aa17.78■□□□□ 0.44
PTPRU-202ENST00000373779 DNAJB2P25686 324 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 CPT1AP50416 773 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 ANKRD22Q5VYY1 191 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 ISLR2Q6UXK2 745 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 FAM136AQ96C01 138 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 PARK7Q99497 189 aaKnown RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 ABI2Q9NYB9 513 aaPredicted RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 CCDC167Q9P0B6 97 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 SMNDC1O75940 238 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 FKBP9O95302 570 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 PTPRAP18433 802 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 FOXN2P32314 431 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 SGO1Q5FBB7 561 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 RNF219Q5W0B1 726 aaPredicted RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 UNC5AQ6ZN44 842 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 FKBP9P1Q75LS8 142 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 KCTD14Q9BQ13 255 aaPredicted RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 SYT15Q9BQS2 421 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 APOL5Q9BWW9 433 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 MUC3BQ9H195 1237 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 NT5MQ9NPB1 228 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 ARHGAP28Q9P2N2 729 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 ERI2A8K979 691 aaKnown RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 UNGP13051 313 aaPredicted RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 PPIDQ08752 370 aaKnown RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 MFSD14CQ5VZR4 134 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 B3GNT6Q6ZMB0 384 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 UNC93AQ86WB7 457 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 RPRD1AQ96P16 312 aaPredicted RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 SEMA6AQ9H2E6 1030 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 RABGEF1Q9UJ41 708 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 HBS1LQ9Y450 684 aaKnown RBP17.77■□□□□ 0.44
PTPRU-202ENST00000373779 SCN11AQ9UI33 1791 aa17.77■□□□□ 0.44
PTPRU-202ENST00000373779 HNRNPRO43390 633 aaKnown RBP17.77■□□□□ 0.43
PTPRU-202ENST00000373779 LRCH4O75427 683 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 B3GAT3O94766 335 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 TWF1Q12792 350 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 DGKZQ13574 1117 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 SAMD4BQ5PRF9 694 aaKnown RBP17.77■□□□□ 0.43
PTPRU-202ENST00000373779 GSTCDQ8NEC7 633 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 SEPT5Q99719 369 aaPredicted RBP17.77■□□□□ 0.43
PTPRU-202ENST00000373779 CINPQ9BW66 212 aaPredicted RBP17.77■□□□□ 0.43
PTPRU-202ENST00000373779 IL22Q9GZX6 179 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 ETAA1Q9NY74 926 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 PPP2R3BQ9Y5P8 575 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 GLP2RO95838 553 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 DRICH1Q6PGQ1 229 aaPredicted RBP17.77■□□□□ 0.43
PTPRU-202ENST00000373779 SH3BP5LQ7L8J4 393 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 C10orf107Q8IVU9 208 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 C7orf26Q96N11 449 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 SLC25A23Q9BV35 468 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 POPDC2Q9HBU9 364 aa17.77■□□□□ 0.43
PTPRU-202ENST00000373779 VPS26AO75436 327 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 FAM155BO75949 473 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 YBX3P16989 372 aaKnown RBP eCLIP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 DAB2P98082 770 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 SNX17Q15036 470 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 CCDC92Q53HC0 331 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 ZC3H3Q8IXZ2 948 aaKnown RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 SETD4Q9NVD3 440 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 FAM95CA0A1B0GW59 222 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms