RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PRDM16Q9HAZ2 1276 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 ADARB2Q9NS39 739 aaKnown RBP11.77□□□□□ -0.52
VCL-202ENST00000372755 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.52
VCL-202ENST00000372755 KPNA4O00629 521 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 CES2O00748 559 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 MRASO14807 208 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ACOX1Q15067 660 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 KRT74Q7RTS7 529 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ACER1Q8TDN7 264 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 RORBQ92753 470 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 PROX1Q92786 737 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 CELF6Q96J87 481 aaKnown RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 VCPIP1Q96JH7 1222 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 S100A13Q99584 98 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 EPB41L4BQ9H329 900 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 L2HGDHQ9H9P8 463 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 DAPK2Q9UIK4 370 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 CRYL1Q9Y2S2 319 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ASNA1O43681 348 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 OR6A2O95222 327 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ENO2P09104 434 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 TSPAN19P0C672 248 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ITGB6P18564 788 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 WEE1P30291 646 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 TUBP50607 506 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 DGUOKQ16854 277 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 FGD3Q5JSP0 725 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 SCARA3Q6AZY7 606 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 CYP20A1Q6UW02 462 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 GLT6D1Q7Z4J2 308 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ZNF605Q86T29 641 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 MAML3Q96JK9 1138 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ZDHHC15Q96MV8 337 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 C1QTNF7Q9BXJ2 289 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 TSPAN16Q9UKR8 245 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 SNCAIPQ9Y6H5 919 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 BCLAF3A2AJT9 711 aaKnown RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 TBKBP1A7MCY6 615 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 H3BN98 237 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 SNPHO15079 494 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 RIPK2O43353 540 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 HS6ST1O60243 411 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 STX11O75558 287 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ETS1P14921 441 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 BOP1Q14137 746 aaKnown RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 FAM126BQ8IXS8 530 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ZCCHC7Q8N3Z6 543 aaKnown RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 ZNF557Q8N988 423 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 MAGEC3Q8TD91 643 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 NMD3Q96D46 503 aaKnown RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 BTBD10Q9BSF8 475 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 MTG1Q9BT17 334 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 FUT8Q9BYC5 575 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 C6orf62Q9GZU0 229 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 TRIT1Q9H3H1 467 aaKnown RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 OSGEPQ9NPF4 335 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 SNTG2Q9NY99 539 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 UBA2Q9UBT2 640 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 LIMD1Q9UGP4 676 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 TMX2Q9Y320 296 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 CLOCKO15516 846 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 TYMPP19971 482 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ELK3P41970 407 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 PAGE2BQ5JRK9 111 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 GATAD2AQ86YP4 633 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 UXS1Q8NBZ7 420 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 ENKURQ8TC29 256 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 METTL6Q8TCB7 284 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 C9orf16Q9BUW7 83 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 MRPL9Q9BYD2 267 aaKnown RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 MMADHCQ9H3L0 296 aaPredicted RBP11.77□□□□□ -0.53
VCL-202ENST00000372755 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 TRPM1Q7Z4N2 1603 aa11.77□□□□□ -0.53
VCL-202ENST00000372755 INPP4BO15327 924 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 PARNO95453 639 aaKnown RBP11.76□□□□□ -0.53
VCL-202ENST00000372755 NUDT14O95848 222 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 IL6P05231 212 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ZNF655Q8N720 491 aaPredicted RBP11.76□□□□□ -0.53
VCL-202ENST00000372755 TRIM63Q969Q1 353 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TRAPPC9Q96Q05 1148 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TMEM237Q96Q45 408 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 VAT1Q99536 393 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 PCDHGA4Q9Y5G9 962 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ATXN2LQ8WWM7 1075 aaKnown RBP11.76□□□□□ -0.53
VCL-202ENST00000372755 OSMRQ99650 979 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
VCL-202ENST00000372755 ENTPD4Q9Y227 616 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 XYLBO75191 536 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 UBOX5O94941 541 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TAB1Q15750 504 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 GRIK4Q16099 956 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 SV2AQ7L0J3 742 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 STK40Q8N2I9 435 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 FBXO10Q9UK96 956 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 KDM6BO15054 1643 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 CD163L1Q9NR16 1453 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms