RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 MAVSQ7Z434 540 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 SETD3Q86TU7 594 aaPredicted RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 TNIP2Q8NFZ5 429 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 GRIN3AQ8TCU5 1115 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 FER1L6Q2WGJ9 1857 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 KRBA1A5PL33 1030 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 TMEM114B3SHH9 223 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 ZNF195O14628 629 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 FOXD2O60548 495 aaPredicted RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 FGF3P11487 239 aaPredicted RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 MYCLP12524 364 aaPredicted RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 XRCC1P18887 633 aaPredicted RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 EPHA3P29320 983 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 DSG3P32926 999 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 JAK3P52333 1124 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 OTUD4Q01804 1114 aaKnown RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 DPYSL3Q14195 570 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 NRF1Q16656 503 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 CYP2A13Q16696 494 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 TRMT1LQ7Z2T5 733 aaKnown RBP18.75■□□□□ 0.59
MMP9-201ENST00000372330 MINDY2Q8NBR6 621 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 TMC2Q8TDI7 906 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 TAMM41Q96BW9 452 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 COQ10BQ9H8M1 238 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 ANLNQ9NQW6 1124 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 CDC14AQ9UNH5 594 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 TTLL3Q9Y4R7 772 aa18.75■□□□□ 0.59
MMP9-201ENST00000372330 RGSL1A5PLK6 1076 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 WDR64B1ANS9 1081 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 GPR25O00155 361 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 NOP56O00567 594 aaKnown RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 SFNP31947 248 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 NUDT2P50583 147 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 CTBSQ01459 385 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 KCNJ8Q15842 424 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 XKR9Q5GH70 373 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 CYP2U1Q7Z449 544 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 DSELQ8IZU8 1212 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.74■□□□□ 0.59
MMP9-201ENST00000372330 RNF169Q8NCN4 708 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 TAS1R2Q8TE23 839 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 PTCD2Q8WV60 388 aaKnown RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 CNDP2Q96KP4 475 aaKnown RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 RMDN3Q96TC7 470 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 PDCD2LQ9BRP1 358 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 RIC8BQ9NVN3 520 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 DKK3Q9UBP4 350 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 NOX1Q9Y5S8 564 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 TMEM191CA6NGB0 347 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 LYPLA1O75608 230 aaPredicted RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 ZMPSTE24O75844 475 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 CCNE2O96020 404 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 ADRB2P07550 413 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 TMEM191BP0C7N4 346 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 CNTFP26441 200 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 NOMO3P69849 1222 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 KRT76Q01546 638 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 PEX6Q13608 980 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 SNRNP35Q16560 246 aaKnown RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 FAM102BQ5T8I3 360 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 FAXCQ5TGI0 409 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 ANKRD26P1Q6NSI1 321 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 ADGRF2Q8IZF7 708 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 PDPRQ8NCN5 879 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 RP9Q8TA86 221 aaKnown RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 TEPSINQ96N21 525 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 LENG8Q96PV6 779 aaPredicted RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 ANKEF1Q9NU02 776 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 TCEAL9Q9UHQ7 104 aa18.74■□□□□ 0.59
MMP9-201ENST00000372330 IPO11Q9UI26 975 aaKnown RBP18.74■□□□□ 0.59
MMP9-201ENST00000372330 TRIM64A6NGJ6 449 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 AIM2O14862 343 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 SLC22A2O15244 555 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 RNASEH2AO75792 299 aaKnown RBP18.73■□□□□ 0.59
MMP9-201ENST00000372330 GSRP00390 522 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 TCF7P36402 384 aaPredicted RBP18.73■□□□□ 0.59
MMP9-201ENST00000372330 MTM1Q13496 603 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 OXA1LQ15070 435 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 PGAM4Q8N0Y7 254 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 ACMSDQ8TDX5 336 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 MMP19Q99542 508 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 PXMP2Q9NR77 195 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 ERVK-11Q9UQG0 969 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 A0A1W2PPW3 197 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 GOLGA8IPA6NC78 632 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 GOLGA8JA6NMD2 632 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 ALOX5P09917 674 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 GABRB3P28472 473 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 BBS12Q6ZW61 710 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 POLNQ7Z5Q5 900 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 TTC30AQ86WT1 665 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 CBWD2Q8IUF1 395 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 TMEM161BQ8NDZ6 487 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 CNDP1Q96KN2 507 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 ZNF641Q96N77 438 aaPredicted RBP18.73■□□□□ 0.59
MMP9-201ENST00000372330 MROQ9BYG7 248 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 PNPOQ9NVS9 261 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 KLHL3Q9UH77 587 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms