RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 RAB3IL1Q8TBN0 382 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PIWIL2Q8TC59 973 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DEPDC1BQ8WUY9 529 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 RCN3Q96D15 328 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TMA16Q96EY4 203 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 GMCL1Q96IK5 515 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 C7orf26Q96N11 449 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CATSPER2Q96P56 530 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SLC29A1Q99808 456 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SLC39A3Q9BRY0 314 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM39BQ9GZU3 492 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DHX35Q9H5Z1 703 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 COG4Q9H9E3 785 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 EVA1BQ9NVM1 165 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 HERC5Q9UII4 1024 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 APOBEC2Q9Y235 224 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PPME1Q9Y570 386 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 FAM149AA5PLN7 773 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF195O14628 629 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 HCRTO43612 131 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 LILRB3O75022 631 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 PENKP01210 267 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 COX4I1P13073 169 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CKMT2P17540 419 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 AOC1P19801 751 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 NR4A1P22736 598 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 GLRBP48167 497 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 NUMBP49757 651 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 MCCD1P59942 119 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 RPS6P62753 249 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 TFAMQ00059 246 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ROR1Q01973 937 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 GBE1Q04446 702 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ATP1A4Q13733 1029 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SLC27A3Q5K4L6 730 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 LDLRAP1Q5SW96 308 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 IL23RQ5VWK5 629 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ELMSAN1Q6PJG2 1045 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 KYAT3Q6YP21 454 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF534Q76KX8 674 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 WDR75Q8IWA0 830 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CCDC60Q8IWA6 550 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 FBXL18Q96ME1 805 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 WRNIP1Q96S55 665 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CIB1Q99828 191 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 TCHPQ9BT92 498 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 TUBB6Q9BUF5 446 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 MSTO1Q9BUK6 570 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 NUF2Q9BZD4 464 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 FAM117AQ9C073 453 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 EPS8L2Q9H6S3 715 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SSU72Q9NP77 194 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 PTTG2Q9NZH5 202 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 WNK3Q9BYP7 1800 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 XIRP2A4UGR9 3374 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 NRAPQ86VF7 1730 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 RBBP6Q7Z6E9 1792 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 MCF2LO15068 1137 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 TPST1O60507 370 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CCNT2O60583 730 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 KRT37O76014 449 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CYP3A5P20815 502 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 EIF4BP23588 611 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 L1CAMP32004 1257 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 AVPR1AP37288 418 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 RGS2P41220 211 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SLC5A3P53794 718 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 HDAC4P56524 1084 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 KLF10Q13118 480 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 FLOT2Q14254 428 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 LPIN1Q14693 890 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 PKDCCQ504Y2 493 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 MTX3Q5HYI7 312 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF362Q5T0B9 420 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 OGFRL1Q5TC84 451 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 WDR78Q5VTH9 848 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ATG16L1Q676U5 607 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 NXNQ6DKJ4 435 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 DRICH1Q6PGQ1 229 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 LYPD8Q6UX82 237 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 BBS12Q6ZW61 710 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CYP4V2Q6ZWL3 525 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 SDCCAG8Q86SQ7 713 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 APLFQ8IW19 511 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 THNSL1Q8IYQ7 743 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 PYROXD2Q8N2H3 581 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 LARGE2Q8N3Y3 721 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 GMCL1P1Q8NEA9 526 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ACTRT2Q8TDY3 377 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 CLEC4DQ8WXI8 215 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 LRTOMTQ8WZ04 291 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ATP2A3Q93084 1043 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 ALKBH8Q96BT7 664 aaKnown RBP5.56□□□□□ -1.52
ATG4A-204ENST00000372246 DTNBP1Q96EV8 351 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 MRGPRX2Q96LB1 330 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 C8orf37Q96NL8 207 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 AGAP2Q99490 1192 aa5.56□□□□□ -1.52
ATG4A-204ENST00000372246 APOL2Q9BQE5 337 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms