RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SLC22A1O15245 554 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 PRPF4O43172 522 aaKnown RBP eCLIP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 DNAJA2O60884 412 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 B3GALNT1O75752 331 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 ANXA13P27216 316 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 CLK3P49761 638 aaKnown RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 CAMK2GQ13555 558 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 COL9A2Q14055 689 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 DPYSQ14117 519 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 LRRC36Q1X8D7 754 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 GALNT12Q8IXK2 581 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 TBC1D15Q8TC07 691 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 THAP3Q8WTV1 239 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 GLG1Q92896 1179 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 SYT17Q9BSW7 474 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 RNF38Q9H0F5 515 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 GOLPH3Q9H4A6 298 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 HEY2Q9UBP5 337 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 AJAP1Q9UKB5 411 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-203ENST00000372232 DSEQ9UL01 958 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 PCDHGA8Q9Y5G5 932 aa9.09□□□□□ -0.95
ATG4A-203ENST00000372232 EMSYQ7Z589 1322 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ZSCAN5BA6NJL1 495 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 NFKBIEO00221 500 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 HRO43593 1189 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 FAM58BPP0C7Q3 252 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 JAK1P23458 1154 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CCNCP24863 283 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CXCR2P25025 360 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 RPS12P25398 132 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 FMO5P49326 533 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CYP2J2P51589 502 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 IST1P53990 364 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 RPS6P62753 249 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 MTMR1Q13613 665 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CBX2Q14781 532 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CLUL1Q15846 466 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 INSCQ1MX18 579 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 DNAL1Q4LDG9 190 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 OGFRL1Q5TC84 451 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ITPRIPL1Q6GPH6 555 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 PPP1R2P3Q6NXS1 205 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 GJB7Q6PEY0 223 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 AGMOQ6ZNB7 445 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 NT5DC3Q86UY8 548 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 SRRM1Q8IYB3 904 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 SYCE1Q8N0S2 351 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 GALNT4Q8N4A0 578 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 HPS1Q92902 700 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 MTBPQ96DY7 904 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 TAAR1Q96RJ0 339 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 FANCEQ9HB96 536 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 DNAJC17Q9NVM6 304 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ANKFY1Q9P2R3 1169 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 NAGPAQ9UK23 515 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ANGPTL3Q9Y5C1 460 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 RBBP6Q7Z6E9 1792 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ASTN2O75129 1339 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 KPNA4O00629 521 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 SCO2O43819 266 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 TSPAN9O75954 239 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ALX3O95076 343 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 LYPLA2O95372 231 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 RPLP1P05386 114 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 C8BP07358 591 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 QARSP47897 775 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 RARRES1P49788 294 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 P2RX3P56373 397 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 PPP2R2BQ00005 443 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CENPCQ03188 943 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 GALNT1Q10472 559 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 OXA1LQ15070 435 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 PGM5Q15124 567 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 MOGQ16653 247 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 AGAP7PQ5VUJ5 663 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ALKBH5Q6P6C2 394 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 PAOXQ6QHF9 649 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 XKR5Q6UX68 686 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CYFIP1Q7L576 1253 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 NLGN2Q8NFZ4 835 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ADAMTS16Q8TE57 1224 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 TRUB1Q8WWH5 349 aaKnown RBP9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CIB1Q99828 191 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 UQCC2Q9BRT2 126 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 KLHL25Q9H0H3 589 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 CAAP1Q9H8G2 361 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 VPS45Q9NRW7 570 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 SACM1LQ9NTJ5 587 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 TBC1D22BQ9NU19 505 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 ANKMY1Q9P2S6 941 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 HMGXB4Q9UGU5 601 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 NENFQ9UMX5 172 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 DTNAQ9Y4J8 743 aa9.08□□□□□ -0.96
ATG4A-203ENST00000372232 K7ENM7 598 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 SGTAO43765 313 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 UGT1A9O60656 530 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 CDH16O75309 829 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 DDHD2O94830 711 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 NR3C2P08235 984 aa9.07□□□□□ -0.96
ATG4A-203ENST00000372232 TGFB3P10600 412 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms