RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 MFAP3P55082 362 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 NOP14P78316 857 aaKnown RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 RNF4P78317 190 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CUL2Q13617 745 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 LRRC32Q14392 662 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ASIC2Q16515 512 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ZNF699Q32M78 642 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 MFSD5Q6N075 450 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 POMZP3Q6PJE2 187 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CYP26C1Q6V0L0 522 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ZNF571Q7Z3V5 609 aaPredicted RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 ZNF280BQ86YH2 543 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 TMTC1Q8IUR5 882 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CCDC112Q8NEF3 446 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 BEST2Q8NFU1 509 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SLC35G2Q8TBE7 412 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 KIAA1524Q8TCG1 905 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ATRIPQ8WXE1 791 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 RABGGTAQ92696 567 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 TAF4BQ92750 862 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 APBB2Q92870 758 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PGBD4Q96DM1 585 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 TRIM44Q96DX7 344 aaPredicted RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 SPAG5Q96R06 1193 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 TAAR9Q96RI9 348 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SLC38A3Q99624 504 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PAAF1Q9BRP4 392 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SYT11Q9BT88 431 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 FTHL17Q9BXU8 183 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PDCL3Q9H2J4 239 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SMYD3Q9H7B4 428 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 NHEJ1Q9H9Q4 299 aaPredicted RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 C1orf112Q9NSG2 853 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 KLHL11Q9NVR0 708 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 TMEM161AQ9NX61 479 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 GFOD1Q9NXC2 390 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 FAM53CQ9NYF3 392 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CNTN6Q9UQ52 1028 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 REXO2Q9Y3B8 237 aaKnown RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 TTC3P53804 2025 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 LCHNA4D1U4 455 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 USP27XA6NNY8 438 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 F8W810 466 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 DDHD2O94830 711 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 HPXP02790 462 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 THP07101 528 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SYPP08247 313 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 FERP16591 822 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CD58P19256 250 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ATICP31939 592 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 RFC2P35250 354 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 USP8P40818 1118 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PRKCIP41743 596 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 RAP1GAPP47736 663 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 LSSP48449 732 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CLCNKBP51801 687 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 EPHB4P54760 987 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SCAND1P57086 179 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 KLHL30Q0D2K2 578 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 DPY19L1Q2PZI1 675 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 WDR72Q3MJ13 1102 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ZNF667Q5HYK9 610 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 NOMO2Q5JPE7 1267 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CNKSR3Q6P9H4 555 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SCARA5Q6ZMJ2 495 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SYDE1Q6ZW31 735 aaPredicted RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 LIMS2Q7Z4I7 341 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SRLQ86TD4 932 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SLC47A2Q86VL8 602 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ZSCAN30Q86W11 494 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CCDC103Q8IW40 242 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 HACE1Q8IYU2 909 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 FIBCD1Q8N539 461 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 LRRC52Q8N7C0 313 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PDZD8Q8NEN9 1154 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PCDH19Q8TAB3 1148 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 SLC20A1Q8WUM9 679 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 CASD1Q96PB1 797 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 PCDHB18PQ96TA0 734 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ZSWIM1Q9BR11 485 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 DESI2Q9BSY9 194 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 HAUS4Q9H6D7 363 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 ELAC1Q9H777 363 aaKnown RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 SP110Q9HB58 689 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 UBN1Q9NPG3 1134 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 GPR160Q9UJ42 338 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 NOCTQ9UK39 431 aaKnown RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 DMTF1Q9Y222 760 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 NME7Q9Y5B8 376 aa3.76□□□□□ -1.81
MCF2-202ENST00000370573 EPN1Q9Y6I3 576 aaPredicted RBP3.76□□□□□ -1.81
MCF2-202ENST00000370573 A0A087X0T9 212 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 CASTOR2A6NHX0 329 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 KPNA7A9QM74 516 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 DDX3XO00571 662 aaKnown RBP eCLIP3.75□□□□□ -1.81
MCF2-202ENST00000370573 PODXLO00592 558 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 ARHGAP6O43182 974 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 HCRTO43612 131 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 AP1G1O43747 822 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 NDUFA10O95299 355 aa3.75□□□□□ -1.81
MCF2-202ENST00000370573 FAM228BP0C875 321 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms