RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ZNF177Q13360 481 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 CDH18Q13634 790 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 RNASEH2BQ5TBB1 312 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 RNF219Q5W0B1 726 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 C17orf99Q6UX52 265 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 RAB44Q7Z6P3 723 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 LGI2Q8N0V4 545 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 DQX1Q8TE96 717 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SCG3Q8WXD2 468 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 RSRC1Q96IZ7 334 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MAGEB18Q96M61 343 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SERPINB11Q96P15 392 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 HIPK3Q9H422 1215 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MIOSQ9NXC5 875 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 AFF4Q9UHB7 1163 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 HAO1Q9UJM8 370 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 A0A1W2PQH9 124 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 CSE1LP55060 971 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 TAF10Q12962 218 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MUM1Q2TAK8 710 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 OLFML1Q6UWY5 402 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 NLRP9Q7RTR0 991 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 TMEM110Q86TL2 294 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 CARNMT1Q8N4J0 409 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 C12orf50Q8NA57 414 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PIK3R5Q8WYR1 880 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 FAM161BQ96MY7 647 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PPCSQ9HAB8 311 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PIGVQ9NUD9 493 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 DTLQ9NZJ0 730 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 CNTN3Q9P232 1028 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MID2Q9UJV3 735 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 AAR2Q9Y312 384 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MFHAS1Q9Y4C4 1052 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PHGDHO43175 533 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PAGE1O75459 146 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MT-CO1P00395 513 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 F7P08709 466 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MYL2P10916 166 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 GFAPP14136 432 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 KPNA2P52292 529 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 DAOAP59103 153 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SLC25A11Q02978 314 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MGAT5Q09328 741 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PLD1Q13393 1074 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 INTS6LQ5JSJ4 861 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 UBAP2Q5T6F2 1119 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MTDHQ86UE4 582 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 NUP93Q8N1F7 819 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SLC35B2Q8TB61 432 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 DDI1Q8WTU0 396 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.3□□□□□ -1.241e-6■■■■■ 41.3
TGFBR3-202ENST00000370399 SLC4A5Q9BY07 1137 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SRRDQ9UH36 339 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SH3BP1Q9Y3L3 701 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PTCH2Q9Y6C5 1203 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 MYO18AQ92614 2054 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 H7C4K7 107 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 CHADO15335 359 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 NCAM2O15394 837 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 METTL18O95568 372 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SP100P23497 879 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 SERPINB4P48594 390 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 ATXN3P54252 364 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 ZNF252P-AS1Q0IIN9 211 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 ITGA9Q13797 1035 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 POLD3Q15054 466 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 PARP6Q2NL67 630 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 N4BP2L1Q5TBK1 243 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 ARHGAP17Q68EM7 881 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 LRRC8DQ7L1W4 858 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 CRYBG2Q8N1P7 616 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 ARHGAP18Q8N392 663 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 RMDN2Q96LZ7 410 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 NAT9Q9BTE0 207 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 KLC4Q9NSK0 619 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 NDFIP2Q9NV92 336 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 RRN3Q9NYV6 651 aa7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 GNEQ9Y223 722 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-202ENST00000370399 UNCXA6NJT0 531 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 A8MX80 341 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 C9IYK1 514 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 SPECC1L-ADORA2AF8WAN1 911 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 HOXA2O43364 376 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 TLR5O60602 858 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 DAB1O75553 588 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 CCNB1P14635 433 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 TAC1P20366 129 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 GEMP55040 296 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 GJA9P57773 515 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 INCA1Q0VD86 236 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 CDH17Q12864 832 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 ELAVL2Q12926 359 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 UGP2Q16851 508 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 CERCAMQ5T4B2 595 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 UNC5AQ6ZN44 842 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 AGMOQ6ZNB7 445 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 OTOP3Q7RTS5 596 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 LINC00523Q86TU6 105 aa7.29□□□□□ -1.24
TGFBR3-202ENST00000370399 TAC4Q86UU9 113 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms