RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 MINPP1Q9UNW1 487 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 POLHQ9Y253 713 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 PRR5-ARHGAP8B1AHC4 643 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 H0YJX3 145 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 RALBP11234 206 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 ZNF3P17036 446 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 ARHGAP8P85298 464 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 SF3B4Q15427 424 aaKnown RBP eCLIP10.65□□□□□ -0.7
PRDM1-201ENST00000369089 ZNF568Q3ZCX4 644 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 HSD17B12Q53GQ0 312 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 TRABD2AQ86V40 505 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 DHFR2Q86XF0 187 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 DGKHQ86XP1 1220 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 C19orf60Q96EN9 201 aa10.65□□□□□ -0.7
PRDM1-201ENST00000369089 E7ENX8 843 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 RNF225M0QZC1 329 aaPredicted RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PRPF4O43172 522 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 SORBS3O60504 671 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 USP17L8P0C7I0 530 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PKNOX1P55347 436 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 DMC1Q14565 340 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 CYP20A1Q6UW02 462 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 NT5DC3Q86UY8 548 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 C8orf59Q8N0T1 100 aaPredicted RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 CCNYL1Q8N7R7 359 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 CELF1Q92879 486 aaKnown RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 ART4Q93070 314 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 NCLNQ969V3 563 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 TRIM9Q9C026 710 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 DYRK4Q9NR20 520 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 ITGA11Q9UKX5 1188 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PCDHA4Q9UN74 947 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 AFG3L2Q9Y4W6 797 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 SALL3Q9BXA9 1300 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 ALX3O95076 343 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 MYCLP12524 364 aaPredicted RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 INSCQ1MX18 579 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 TRIM71Q2Q1W2 868 aaKnown RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 IFNEQ86WN2 208 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 KBTBD8Q8NFY9 601 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 SCPEP1Q9HB40 452 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PAQR5Q9NXK6 330 aaPredicted RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PTBP2Q9UKA9 531 aaKnown RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 COL15A1P39059 1388 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 USP32Q8NFA0 1604 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 MROH2AA6NES4 1674 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 DCXO43602 365 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 SCARF1Q14162 830 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 ARSKQ6UWY0 536 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 HPS6Q86YV9 775 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 DEPDC4Q8N2C3 294 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 TBC1D19Q8N5T2 526 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 SPOCK2Q92563 424 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 TP53INP1Q96A56 240 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 COQ3Q9NZJ6 369 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 SYNCRIPO60506 623 aaKnown RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 RFPL2O75678 378 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 ABHD2P08910 425 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 CES1P23141 567 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PKLRP30613 574 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PDIA6Q15084 440 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 KRT74Q7RTS7 529 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 ZNF598Q86UK7 904 aaKnown RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 LSMEM1Q8N8F7 131 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 WDR36Q8NI36 951 aaKnown RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 HPS4Q9NQG7 708 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 INIPQ9NRY2 104 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 PCYOX1Q9UHG3 505 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 B3GNT3Q9Y2A9 372 aa10.64□□□□□ -0.71
PRDM1-201ENST00000369089 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
PRDM1-201ENST00000369089 YWHAHQ04917 246 aaPredicted RBP10.63□□□□□ -0.71
PRDM1-201ENST00000369089 TXNRD1Q16881 649 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 CCDC142Q17RM4 750 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 KIF18BQ86Y91 864 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 NSUN6Q8TEA1 469 aaKnown RBP10.63□□□□□ -0.71
PRDM1-201ENST00000369089 ARL5BQ96KC2 179 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 AGPAT1Q99943 283 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 BDH2Q9BUT1 245 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 SIAEQ9HAT2 523 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 CD163L1Q9NR16 1453 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 PPLO60437 1756 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 FAM92AA1XBS5 289 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 OR6C70A6NIJ9 312 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 YKT6O15498 198 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 MAP3K6O95382 1288 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 LDLRP01130 860 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 RBP3P10745 1247 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 COX4I1P13073 169 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 TGM2P21980 687 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 HNRNPH3P31942 346 aaKnown RBP10.63□□□□□ -0.71
PRDM1-201ENST00000369089 FOXN2P32314 431 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 RCVRNP35243 200 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 DGCR6Q14129 220 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 UBAP2LQ14157 1087 aaKnown RBP10.63□□□□□ -0.71
PRDM1-201ENST00000369089 EPHA7Q15375 998 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 MICALL2Q8IY33 904 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 CHURC1Q8WUH1 139 aa10.63□□□□□ -0.71
PRDM1-201ENST00000369089 APBB2Q92870 758 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms