RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 TRUB2O95900 331 aaKnown RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 GABRR2P28476 465 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ADORA2BP29275 332 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 MIPP30301 263 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 CXCR5P32302 372 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 HTR7P34969 479 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 MARCKSL1P49006 195 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 KPNA1P52294 538 aaPredicted RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 EPHA5P54756 1037 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 TAS2R40P59535 323 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 PLD1Q13393 1074 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ORC1Q13415 861 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 NNTQ13423 1086 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ELOAQ14241 798 aaKnown RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 GAS6Q14393 721 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 DPYSL2Q16555 572 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 LONRF2Q1L5Z9 754 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ZNF528Q3MIS6 628 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 MGAT5BQ3V5L5 792 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 CCDC14Q49A88 953 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 C2CD6Q53TS8 623 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 TFDP3Q5H9I0 405 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 GPR158Q5T848 1215 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 HEATR6Q6AI08 1181 aaKnown RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 OR6B2Q6IFH4 312 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 TRNP1Q6NT89 227 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 PRR23BQ6ZRT6 265 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 Q6ZS52 159 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 BBS12Q6ZW61 710 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 CYP4V2Q6ZWL3 525 aaPredicted RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 GAREM2Q75VX8 874 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 BHLHA9Q7RTU4 235 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ERMP1Q7Z2K6 904 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 LRRTM3Q86VH5 581 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ARID3BQ8IVW6 561 aaPredicted RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 MAP7D3Q8IWC1 876 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 MFSD6LQ8IWD5 586 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 SCUBE3Q8IX30 993 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ARHGAP18Q8N392 663 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 LRRN4CLQ8ND94 238 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 CSGALNACT1Q8TDX6 532 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 OSBPL8Q9BZF1 889 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ATXN3LQ9H3M9 355 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 FBXO44Q9H4M3 255 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 GDF3Q9NR23 364 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ST7Q9NRC1 585 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 KRT82Q9NSB4 513 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 C2orf42Q9NWW7 574 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 ZSCAN32Q9NX65 697 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNX27-201ENST00000368838 GTSE1Q9NYZ3 720 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 CLIC5Q9NZA1 410 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 EHD2Q9NZN4 543 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 STIM2Q9P246 746 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 TJP2Q9UDY2 1190 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 USP18Q9UMW8 372 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 NOVA2Q9UNW9 492 aaKnown RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 MYO18AQ92614 2054 aaKnown RBP9.11□□□□□ -0.95
SNX27-201ENST00000368838 hCG_1818297A0A087WSY0 165 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 C3orf70A6NLC5 250 aaPredicted RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 CHURC1-FNTBB4DL54 471 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ARNTLO00327 626 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 NDC80O14777 642 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 HCRTO43612 131 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 LILRB5O75023 590 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 BEST1O76090 585 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 PRAMEF12O95522 483 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ZBED1O96006 694 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 F12P00748 615 aaPredicted RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 IGLV3-25P01717 112 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ATF6P18850 670 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 KDELR1P24390 212 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ACAT1P24752 427 aaKnown RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 CDKN2BP42772 138 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 RPS9P46781 194 aaKnown RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 HCAR3P49019 387 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 FNTBP49356 437 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 GPR15P49685 360 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 TKTL1P51854 596 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 HDAC4P56524 1084 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 LMNB2Q03252 620 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 TNK2Q07912 1038 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 CUL1Q13616 776 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ELF2Q15723 593 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 CCDC142Q17RM4 750 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 CRTC2Q53ET0 693 aaPredicted RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 SDHAF4Q5VUM1 108 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 SNX30Q5VWJ9 437 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 C8orf74Q6P047 294 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 TXNDC11Q6PKC3 985 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 MON1AQ86VX9 555 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 SPATA2LQ8IUW3 424 aaPredicted RBP9.1□□□□□ -0.95
SNX27-201ENST00000368838 SIX6OS1Q8N1H7 587 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 PRELID2Q8N945 189 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 ZBTB44Q8NCP5 570 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 TTC16Q8NEE8 873 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 CCHCR1Q8TD31 782 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 DEPDC1BQ8WUY9 529 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 OVCA2Q8WZ82 227 aa9.1□□□□□ -0.95
SNX27-201ENST00000368838 MS4A14Q96JA4 679 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms