RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ASLP04424 464 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 CSKP41240 450 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 ACADSBP45954 432 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 RPS24P62847 133 aaKnown RBP16.61■□□□□ 0.25
CKS1B-202ENST00000368436 BECN1Q14457 450 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 KIF19Q2TAC6 998 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 MS4A13Q5J8X5 152 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 SYPL2Q5VXT5 272 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 ZNF776Q68DI1 518 aaPredicted RBP16.61■□□□□ 0.25
CKS1B-202ENST00000368436 USP30Q70CQ3 517 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 SLCO6A1Q86UG4 719 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 PNPLA1Q8N8W4 532 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 SNX19Q92543 992 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 ORAI3Q9BRQ5 295 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 MTG2Q9H4K7 406 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 TM9SF3Q9HD45 589 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 SCML1Q9UN30 329 aa16.61■□□□□ 0.25
CKS1B-202ENST00000368436 ZZEF1O43149 2961 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 TYW5A2RUC4 315 aaKnown RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 AFPP02771 609 aaKnown RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 CD27P26842 260 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 GRIA4P48058 902 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 ST8SIA6P61647 398 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 TEAD4Q15561 434 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 HNRNPA1L2Q32P51 320 aaKnown RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 TTC31Q49AM3 519 aaPredicted RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 FSCBQ5H9T9 825 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 DENND1BQ6P3S1 775 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 CCNI2Q6ZMN8 369 aaPredicted RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 TMEM110Q86TL2 294 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 TAC4Q86UU9 113 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 TRIM62Q9BVG3 475 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 INTS2Q9H0H0 1204 aaKnown RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 PABPC3Q9H361 631 aaKnown RBP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 CTNND2Q9UQB3 1225 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.6■□□□□ 0.25
CKS1B-202ENST00000368436 SNX11Q9Y5W9 270 aa16.6■□□□□ 0.25
CKS1B-202ENST00000368436 KNL1Q8NG31 2342 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 TAF4O00268 1085 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 FLRT2O43155 660 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 PAPSS1O43252 624 aaPredicted RBP16.59■□□□□ 0.25
CKS1B-202ENST00000368436 SIN3BO75182 1162 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 DKK1O94907 266 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 FSBPO95073 299 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 LUC7L3O95232 432 aaKnown RBP16.59■□□□□ 0.25
CKS1B-202ENST00000368436 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 IGHV4-34P06331 123 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 SRPRAP08240 638 aaKnown RBP16.59■□□□□ 0.25
CKS1B-202ENST00000368436 STX17P56962 302 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 EIF4EBP2Q13542 120 aaPredicted RBP16.59■□□□□ 0.25
CKS1B-202ENST00000368436 DCAF6Q58WW2 860 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 C9orf64Q5T6V5 341 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 CFAP52Q8N1V2 620 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 CARNMT1Q8N4J0 409 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 ADAM32Q8TC27 787 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 ZNF606Q8WXB4 792 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 FAM149B1Q96BN6 582 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 CDC6Q99741 560 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 SRRTQ9BXP5 876 aaKnown RBP16.59■□□□□ 0.25
CKS1B-202ENST00000368436 ST7Q9NRC1 585 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 TOR4AQ9NXH8 423 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 CYTH4Q9UIA0 394 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 XPO7Q9UIA9 1087 aaKnown RBP16.59■□□□□ 0.25
CKS1B-202ENST00000368436 ERVW-1Q9UQF0 538 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 NCKAP1Q9Y2A7 1128 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 ANKRD6Q9Y2G4 727 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 CABIN1Q9Y6J0 2220 aa16.59■□□□□ 0.25
CKS1B-202ENST00000368436 PKD1L2Q7Z442 2459 aa16.58■□□□□ 0.25
CKS1B-202ENST00000368436 TARSL2A2RTX5 802 aaKnown RBP16.58■□□□□ 0.24
CKS1B-202ENST00000368436 C10orf142B7Z368 130 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 CAPN9O14815 690 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 MED7O43513 233 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 KRT5P13647 590 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 YWHAZP63104 245 aaKnown RBP16.58■□□□□ 0.24
CKS1B-202ENST00000368436 PAK1Q13153 545 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 CDH18Q13634 790 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 SUZ12Q15022 739 aaKnown RBP16.58■□□□□ 0.24
CKS1B-202ENST00000368436 PITRM1Q5JRX3 1037 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 KIAA0895LQ68EN5 471 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 CCDC117Q8IWD4 279 aaPredicted RBP16.58■□□□□ 0.24
CKS1B-202ENST00000368436 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
CKS1B-202ENST00000368436 RHBDD1Q8TEB9 315 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 IGSF8Q969P0 613 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 POPDC2Q9HBU9 364 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 UBE2TQ9NPD8 197 aaPredicted RBP16.58■□□□□ 0.24
CKS1B-202ENST00000368436 FBXL12Q9NXK8 326 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 ITIH6Q6UXX5 1313 aa16.58■□□□□ 0.24
CKS1B-202ENST00000368436 SPEGQ15772 3267 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 E5RJQ4 531 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 BIN1O00499 593 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 RNASEH1O60930 286 aaKnown RBP16.57■□□□□ 0.24
CKS1B-202ENST00000368436 LETM1O95202 739 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-202ENST00000368436 TRUB2O95900 331 aaKnown RBP16.57■□□□□ 0.24
CKS1B-202ENST00000368436 MOCS2O96007 188 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-202ENST00000368436 TACR2P21452 398 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 CTSOP43234 321 aaPredicted RBP16.57■□□□□ 0.24
CKS1B-202ENST00000368436 CTSKP43235 329 aa16.57■□□□□ 0.24
CKS1B-202ENST00000368436 GALCP54803 685 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms