RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 PEX5LQ8IYB4 626 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 FUKQ8N0W3 1084 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 PIK3C3Q8NEB9 887 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 DENND1AQ8TEH3 1009 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 RABGGTAQ92696 567 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 BADQ92934 168 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 BICD1Q96G01 975 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 C8orf49Q96NF6 230 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 GPHA2Q96T91 129 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 SLF1Q9BQI6 1058 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 PLA2G12BQ9BX93 195 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 CAPS2Q9BXY5 557 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 B3GNT5Q9BYG0 378 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 TXLNGYQ9BZA5 131 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 TRIM7Q9C029 511 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 UBN1Q9NPG3 1134 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 VPS45Q9NRW7 570 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 INTS10Q9NVR2 710 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 UBAP1Q9NZ09 502 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 HECAQ9UBI9 543 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 L1RE1Q9UN81 338 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 JAG2Q9Y219 1238 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 CNPY2Q9Y2B0 182 aa5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 CFAP20Q9Y6A4 193 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-204ENST00000368292 ZFHX2Q9C0A1 2572 aaPredicted RBP5.4□□□□□ -1.55
ECHDC1-204ENST00000368292 COL4A6Q14031 1691 aa5.4□□□□□ -1.55
ECHDC1-204ENST00000368292 MYO15AQ9UKN7 3530 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 NCOR2Q9Y618 2525 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 PRRC2BQ5JSZ5 2229 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 CLRN2A0PK11 232 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 LACTBL1A8MY62 500 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 STX6O43752 255 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 NMT2O60551 498 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 PQBP1O60828 265 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 KINO60870 393 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 ZNF623O75123 536 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 DDHD2O94830 711 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 CYP1A2P05177 515 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 HMOX1P09601 288 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 SNRPA1P09661 255 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 GAAP10253 952 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 CETPP11597 493 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 HDCP19113 662 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 MATR3P43243 847 aaKnown RBP eCLIP5.39□□□□□ -1.558e-7■■■■■ 31.9
ECHDC1-204ENST00000368292 SLC6A9P48067 706 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 CLCN2P51788 898 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 MAP2K6P52564 334 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 AGFG1P52594 562 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 DRG2P55039 364 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 DCAF7P61962 342 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 CTAG1AP78358 180 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 TEFQ10587 303 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 GEN1Q17RS7 908 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 CCDC38Q502W7 563 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 FKBP15Q5T1M5 1219 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 KAZNQ674X7 775 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 OLFML1Q6UWY5 402 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 Q6ZSN1 163 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 Q6ZVL8 140 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 PLEKHM3Q6ZWE6 761 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 GALNT7Q86SF2 657 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 ADGRE4PQ86SQ3 457 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 SPATA2LQ8IUW3 424 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 TRMT2AQ8IZ69 625 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 TMEM57Q8N5G2 664 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 ESX1Q8N693 406 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 ANKRD53Q8N9V6 530 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 SPERTQ8NA61 448 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 AVL9Q8NBF6 648 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 SHCBP1Q8NEM2 672 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 OTUD7AQ8TE49 926 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 UCMAQ8WVF2 138 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 GCDHQ92947 438 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 ATP2A3Q93084 1043 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 RPL10LQ96L21 214 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 PIGSQ96S52 555 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 DMRTA2Q96SC8 542 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 TBCBQ99426 244 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 C1QTNF3Q9BXJ4 246 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 C2orf40Q9H1Z8 148 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 BHMT2Q9H2M3 363 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 MSL2Q9HCI7 577 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 OLA1Q9NTK5 396 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 CHMP5Q9NZZ3 219 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 TBC1D7Q9P0N9 293 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 C19orf53Q9UNZ5 99 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 SIK3Q9Y2K2 1263 aa5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 FASNP49327 2511 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-204ENST00000368292 DNAH14Q0VDD8 3507 aa5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 SETXQ7Z333 2677 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 FAM171A2A8MVW0 826 aa5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 AP3B1O00203 1094 aa5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 PDHXO00330 501 aa5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 RTN2O75298 545 aa5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 PALMO75781 387 aa5.38□□□□□ -1.55
ECHDC1-204ENST00000368292 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms