RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 COL1A2P08123 1366 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 SYCE1LA8MT33 242 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 CILPO75339 1184 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 ASGR1P07306 291 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 TFE3P19532 575 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 NFKB1P19838 968 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 PBLDP30039 288 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 RPL9P32969 192 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 JAM2P57087 298 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 CXorf38Q8TB03 319 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 CCDC126Q96EE4 140 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 VAT1Q99536 393 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 TBL1YQ9BQ87 522 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 DUSP16Q9BY84 665 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 APOBEC3GQ9HC16 384 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 SYTL2Q9HCH5 934 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 SLC4A7Q9Y6M7 1214 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 GOLGA4Q13439 2230 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 ZNF536O15090 1300 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 DHX15O43143 795 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 AMHP03971 560 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 CKBP12277 381 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 SP2Q02086 613 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 MBTD1Q05BQ5 628 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 CYB5D1Q6P9G0 228 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 GMLQ99445 158 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 UBA2Q9UBT2 640 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 PADI3Q9ULW8 664 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 TOMM70O94826 608 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 OR4Q2P0C623 313 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ZBTB48P10074 688 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 TUSC3Q13454 348 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 SDE2Q6IQ49 451 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 FOXR1Q6PIV2 292 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 PSTKQ8IV42 348 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 MYO1HQ8N1T3 1032 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ZNF333Q96JL9 665 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 DEFB118Q96PH6 123 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 YIPF3Q9GZM5 350 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 RGS18Q9NS28 235 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 AJAP1Q9UKB5 411 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 PLA2G4CQ9UP65 541 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 DUOX1Q9NRD9 1551 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ITGAVP06756 1048 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ATP4AP20648 1035 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 DRG2P55039 364 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 SPDYE7PQ495Y7 208 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 SPANXN3Q5MJ09 141 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 LCLAT1Q6UWP7 414 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 UCMAQ8WVF2 138 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 TFAP2BQ92481 460 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ZNF670Q9BS34 389 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 NTPCRQ9BSD7 190 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 CRYL1Q9Y2S2 319 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 SPEF2Q9C093 1822 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 DDX3YO15523 660 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 NQO1P15559 274 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 STX5Q13190 355 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 FLOT2Q14254 428 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 NOL9Q5SY16 702 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 EFL1Q7Z2Z2 1120 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 CACUL1Q86Y37 369 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 LHX5Q9H2C1 402 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 PCDH18Q9HCL0 1135 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 GID8Q9NWU2 228 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 TRDMT1O14717 391 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 CHADO15335 359 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 AVILO75366 819 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 CCND1P24385 295 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 GRIK3Q13003 919 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 PDPK2PQ6A1A2 396 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 TOP6BLQ8N6T0 577 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 TDRD5Q8NAT2 981 aaKnown RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ZNF75CPQ92670 426 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-203ENST00000368207 ART4Q93070 314 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 NOD2Q9HC29 1040 aa12.57□□□□□ -0.4
PTPRK-203ENST00000368207 XPO1O14980 1071 aaKnown RBP12.56□□□□□ -0.4
PTPRK-203ENST00000368207 ARIH2O95376 493 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 RPA3P35244 121 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-203ENST00000368207 KCNA10Q16322 511 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 DCLRE1AQ6PJP8 1040 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-203ENST00000368207 TEX9Q8N6V9 391 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 BRI3BPQ8WY22 251 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-203ENST00000368207 LRRC39Q96DD0 335 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 TXNRD2Q9NNW7 524 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 SIX2Q9NPC8 291 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 SPASTQ9UBP0 616 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 PCDHA2Q9Y5H9 948 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 PTCH2Q9Y6C5 1203 aa12.56□□□□□ -0.4
PTPRK-203ENST00000368207 TRIM13O60858 407 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms