RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CYP2S1Q96SQ9 504 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 RANBP3Q9H6Z4 567 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 C12orf10Q9HB07 376 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 TUBP50607 506 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 CDKAL1Q5VV42 579 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 BSPRYQ5W0U4 402 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 ACCSQ96QU6 501 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 MIPEPQ99797 713 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 DNTTIP1Q9H147 329 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF624Q9P2J8 865 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 PMF1-BGLAPU3KQ54 211 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 UBE2QL1A1L167 161 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 UBAP1LF5GYI3 381 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 LCP1P13796 627 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 PSMC6P62333 389 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 BAMBIQ13145 260 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 LPIN1Q14693 890 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 FAM71DQ8N9W8 422 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 RIT2Q99578 217 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 FAM118BQ9BPY3 351 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 SLC7A11Q9UPY5 501 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 PRPSAP2O60256 369 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 EPHA5P54756 1037 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 AQP5P55064 265 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 PABPC1LQ4VXU2 614 aaKnown RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 METTL24Q5JXM2 366 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 TTC39BQ5VTQ0 682 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 NIPAL1Q6NVV3 410 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 SLC44A2Q8IWA5 706 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 DDX39AO00148 427 aaKnown RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF197O14709 1029 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 EGFRP00533 1210 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 CD9P21926 228 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 MAPK3P27361 379 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 MTM1Q13496 603 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 COTL1Q14019 142 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 TRIP4Q15650 581 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 SLC2A14Q8TDB8 520 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 ST6GALNAC4Q9H4F1 302 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 MARCH7Q9H992 704 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 NUP153P49790 1475 aaKnown RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 KRT33AO76009 404 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 MOCS3O95396 460 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 FXR2P51116 673 aaKnown RBP eCLIP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 ARHGAP44Q17R89 818 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 EXOC3L2Q2M3D2 409 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 KIF18BQ86Y91 864 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 XAGE3Q8WTP9 111 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 TSEN34Q9BSV6 310 aaKnown RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF556Q9HAH1 456 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 UGT2A1Q9Y4X1 527 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 GSTM2P28161 218 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 TAS2R43P59537 309 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 CDKL4Q5MAI5 379 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 CACTIN-AS1Q8N1I8 211 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 AURKBQ96GD4 344 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 SELENONQ9NZV5 590 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 BARX2Q9UMQ3 279 aaPredicted RBP3.84□□□□□ -1.8
SYNE1-207ENST00000367255 MAST1Q9Y2H9 1570 aa3.84□□□□□ -1.8
SYNE1-207ENST00000367255 PROCP04070 461 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 KRT1P04264 644 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NCAM1P13591 858 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PLEKHN1Q494U1 663 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NAIF1Q69YI7 327 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PPIL6Q8IXY8 311 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TTYH1Q9H313 450 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GPATCH2Q9NW75 528 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TLL2Q9Y6L7 1015 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SLIT1O75093 1534 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FASP25445 335 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 RPL13AP3Q6NVV1 102 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CCDC103Q8IW40 242 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 DPF2Q92785 391 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ERVW-1Q9UQF0 538 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SYNJ2BP-COX16A0A087WUM0 186 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CHRM5P08912 532 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FGL1Q08830 312 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NLRX1Q86UT6 975 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 LONP2Q86WA8 852 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MICU2Q8IYU8 434 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 APPL2Q8NEU8 664 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 C9orf72Q96LT7 481 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ADGRB3O60242 1522 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ANKDD1BA6NHY2 528 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 OR2W6PQ8NHA6 318 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TRIM9Q9C026 710 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 HESX1Q9UBX0 185 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHB6Q9Y5E3 794 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NSUN7Q8NE18 718 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MAGI3Q5TCQ9 1506 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TSPAN4O14817 238 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NR3C2P08235 984 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 VARSP26640 1264 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF45Q02386 682 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 DRAP1Q14919 205 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 EFHC1Q5JVL4 640 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CACHD1Q5VU97 1274 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 LIX1LQ8IVB5 337 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SLC7A3Q8WY07 619 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 AIF1LQ9BQI0 150 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms