RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ZC3H12BQ5HYM0 836 aaKnown RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 PCYOX1LQ8NBM8 494 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 DHX33Q9H6R0 707 aaKnown RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 DCDC2Q9UHG0 476 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 FAM153AQ9UHL3 310 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 RNF112Q9ULX5 631 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 PSMD12O00232 456 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 RASSF9O75901 435 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 CCL5P13501 91 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 KDELR1P24390 212 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 SEC24CP53992 1094 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 PRMT2P55345 433 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 BMPR2Q13873 1038 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 GPR158Q5T848 1215 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 FAM35AQ86V20 835 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 CCDC126Q96EE4 140 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 CYP4F12Q9HCS2 524 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 ARHGAP28Q9P2N2 729 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 DERAQ9Y315 318 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 MAFBQ9Y5Q3 323 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 V9GYQ6 96 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 CES2O00748 559 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 IL10P22301 178 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 KRT72Q14CN4 511 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 PHF13Q86YI8 300 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 BAP1Q92560 729 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 ILKAPQ9H0C8 392 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 PADI3Q9ULW8 664 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 LTBP3Q9NS15 1303 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 TRPC5OSA6NMA1 111 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 NEDD8-MDP1E9PL57 170 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 ENO3P13929 434 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 LSP1P33241 339 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 TLE2Q04725 743 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 SLC24A5Q71RS6 500 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 SYTL1Q8IYJ3 562 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 TRIML2Q8N7C3 387 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 C2orf49Q9BVC5 232 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 L1RE1Q9UN81 338 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 SPACA6W5XKT8 324 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 HPGDP15428 266 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 CNTFP26441 200 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 BCL2L1Q07817 233 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 DNAJC3Q13217 504 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 FAM183BPQ6ZVS7 135 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 CLIP3Q96DZ5 547 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 OTUB1Q96FW1 271 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 IGF2BP3O00425 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 FGF10O15520 208 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 B4GALT4O60513 344 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 RBL1P28749 1068 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 NPY2RP49146 381 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 HIRAP54198 1017 aaPredicted RBP11.85□□□□□ -0.51
SYNE1-204ENST00000367248 C21orf59P57076 290 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 INSCQ1MX18 579 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 SERAC1Q96JX3 654 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 ING2Q9H160 280 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 SEMA4AQ9H3S1 761 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 MYOM1P52179 1685 aa11.85□□□□□ -0.51
SYNE1-204ENST00000367248 ZNF862O60290 1169 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 CYP1A2P05177 515 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 PBX3P40426 434 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 SETD3Q86TU7 594 aaPredicted RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TTC7BQ86TV6 843 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 DNPEPQ9ULA0 475 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 PCDHA2Q9Y5H9 948 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 OPLAHO14841 1288 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 EFCAB14O75071 495 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 SERPINI2O75830 405 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 FKBP9O95302 570 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 EIF2S1P05198 315 aaKnown RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 RPL17P18621 184 aaKnown RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 CD151P48509 253 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 ALDH9A1P49189 494 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 KCNK10P57789 538 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 FKBP9P1Q75LS8 142 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 CXorf40AQ8TE69 158 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 PIK3R5Q8WYR1 880 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 CHST7Q9NS84 486 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 FMN2Q9NZ56 1722 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 LOC100653049A0A140TA62 436 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 SKAP2O75563 359 aaPredicted RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 KRT34O76011 436 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 NCALDP61601 193 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 AP2B1P63010 937 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 ANKS6Q68DC2 871 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 LAYNQ6UX15 382 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TMC5Q6UXY8 1006 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 PRR23BQ6ZRT6 265 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 MDM1Q8TC05 714 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 CCDC90BQ9GZT6 254 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms