RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FYNP06241 537 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 GLI1P08151 1106 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 SRPRAP08240 638 aaKnown RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 C1QTNF9P0C862 333 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 CSKP41240 450 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 GRIA4P48058 902 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 OXCT1P55809 520 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 RPS14P62263 151 aaKnown RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 SUZ12Q15022 739 aaKnown RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 TRIP6Q15654 476 aaKnown RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 NADSYN1Q6IA69 706 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 DENND1BQ6P3S1 775 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 TMEM110Q86TL2 294 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 CHSY1Q86X52 802 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 KDF1Q8NAX2 398 aaPredicted RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 WFDC5Q8TCV5 224 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 PPP1R9BQ96SB3 815 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 NUCKS1Q9H1E3 243 aaKnown RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 RSPH9Q9H1X1 276 aaPredicted RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.36■□□□□ 0.05
CTSD-202ENST00000367196 KIAA1522Q9P206 1035 aaPredicted RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 KIAA1468Q9P260 1216 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 APOBEC2Q9Y235 224 aaKnown RBP15.36■□□□□ 0.05
CTSD-202ENST00000367196 CEP83Q9Y592 693 aa15.36■□□□□ 0.05
CTSD-202ENST00000367196 PAPSS1O43252 624 aaPredicted RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 TRUB2O95900 331 aaKnown RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 CALCAP01258 141 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 SPINK2P20155 84 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 ABCB4P21439 1286 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 ACSL1P33121 698 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 NNMTP40261 264 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 USP8P40818 1118 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 RPS24P62847 133 aaKnown RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 CDK17Q00537 523 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 PDCLQ13371 301 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 SLC12A1Q13621 1099 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 ARID5BQ14865 1188 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 TPD52L1Q16890 204 aaPredicted RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 EXOC3L4Q17RC7 722 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 HNRNPA1L2Q32P51 320 aaKnown RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 LRSAM1Q6UWE0 723 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 FAM114A1Q8IWE2 563 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 ADAM32Q8TC27 787 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 GANCQ8TET4 914 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 CRACR2AQ9BSW2 395 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 PABPC3Q9H361 631 aaKnown RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 C6orf106Q9H6K1 298 aaPredicted RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 FAM204AQ9H8W3 233 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 TM7SF3Q9NS93 570 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 ASNSD1Q9NWL6 643 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 TPX2Q9ULW0 747 aaKnown RBP15.35■□□□□ 0.05
CTSD-202ENST00000367196 PCDHGB2Q9Y5G2 931 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 IGF2RP11717 2491 aa15.35■□□□□ 0.05
CTSD-202ENST00000367196 EDDM13A0A1B0GTR0 161 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 TARSL2A2RTX5 802 aaKnown RBP15.34■□□□□ 0.05
CTSD-202ENST00000367196 FLRT2O43155 660 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 HSF2BPO75031 334 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 FSBPO95073 299 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 TACR2P21452 398 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 CD27P26842 260 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 CCR1P32246 355 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 PTK2Q05397 1052 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 SULT2A1Q06520 285 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 ARHGAP44Q17R89 818 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 HLA-BQ31612 363 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 DCAF6Q58WW2 860 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 PITRM1Q5JRX3 1037 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 EFHC1Q5JVL4 640 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 RABGAP1LQ5R372 815 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 SYPL2Q5VXT5 272 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 ADAT2Q7Z6V5 191 aaKnown RBP15.34■□□□□ 0.05
CTSD-202ENST00000367196 LGI2Q8N0V4 545 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 MLKLQ8NB16 471 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 SETD7Q8WTS6 366 aaKnown RBP15.34■□□□□ 0.05
CTSD-202ENST00000367196 GATA6Q92908 595 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 RNF34Q969K3 372 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 SKA1Q96BD8 255 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 LMLNQ96KR4 655 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 CDC6Q99741 560 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 ZMIZ1Q9ULJ6 1067 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 ERVW-1Q9UQF0 538 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 NUMA1Q14980 2115 aa15.34■□□□□ 0.05
CTSD-202ENST00000367196 LRRC72A6NJI9 287 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 KCNU1A8MYU2 1149 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 TOP3BO95985 862 aaKnown RBP15.33■□□□□ 0.04
CTSD-202ENST00000367196 ADH1BP00325 375 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 IGLV3-25P01717 112 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 FTH1P19P0C7X4 201 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 MTIF2P46199 727 aaKnown RBP15.33■□□□□ 0.04
CTSD-202ENST00000367196 ECT2LQ008S8 904 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 INAVAQ3KP66 663 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 ZC3H12AQ5D1E8 599 aaKnown RBP15.33■□□□□ 0.04
CTSD-202ENST00000367196 RAP1GAP2Q684P5 730 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 RAB44Q7Z6P3 723 aaPredicted RBP15.33■□□□□ 0.04
CTSD-202ENST00000367196 GLRX5Q86SX6 157 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 DHX40Q8IX18 779 aaKnown RBP15.33■□□□□ 0.04
CTSD-202ENST00000367196 CFAP52Q8N1V2 620 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 C1orf216Q8TAB5 229 aa15.33■□□□□ 0.04
CTSD-202ENST00000367196 ZCCHC14Q8WYQ9 949 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms