RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 PTP4A2Q12974 167 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 TRIM72Q6ZMU5 477 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 MON1BQ7L1V2 547 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 BHLHA9Q7RTU4 235 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 PHLDB2Q86SQ0 1253 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 SLCO6A1Q86UG4 719 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 TMTC1Q8IUR5 882 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 NAXDQ8IW45 347 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 NUP93Q8N1F7 819 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 PGBD3Q8N328 593 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 IL17RCQ8NAC3 791 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 TMEM35BQ8NCS4 154 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 CCDC112Q8NEF3 446 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 CCDC26Q8TAB7 109 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
MRPL55-211ENST00000366738 P2RY11Q96G91 374 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 CCDC42Q96M95 316 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 DNAI2Q9GZS0 605 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 CCSER2Q9H7U1 834 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 SCUBE2Q9NQ36 999 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 PYCARDQ9ULZ3 195 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 CEP83Q9Y592 693 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
MRPL55-211ENST00000366738 MYH10P35580 1976 aa8.53□□□□□ -1.04
MRPL55-211ENST00000366738 MYOFQ9NZM1 2061 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 A0A0A0MRY4 1105 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 RCCD1A6NED2 376 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 EIF3CLB5ME19 914 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ARHGAP6O43182 974 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 PAPSS1O43252 624 aaPredicted RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 GJB3O75712 270 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 KAT7O95251 611 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 LCA5LO95447 670 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 MBL2P11226 248 aaPredicted RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ABCB4P21439 1286 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 MMP8P22894 467 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 YWHAQP27348 245 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 HOXD12P35452 270 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 CYLC1P35663 651 aaPredicted RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 DPP6P42658 865 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 NSFP46459 744 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 PPP3CCP48454 512 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 RPL34P49207 117 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 MRPS21P82921 87 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 KDSRQ06136 332 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 C19orf57Q0VDD7 668 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 NR1H3Q13133 447 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 HNRNPDQ14103 355 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 RAB41Q5JT25 222 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 LY6G5CQ5SRR4 150 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 CCDC122Q5T0U0 273 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 SNX30Q5VWJ9 437 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ACAD10Q6JQN1 1059 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ALKBH5Q6P6C2 394 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 FAM183BPQ6ZVS7 135 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 VPS36Q86VN1 386 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 XYLT1Q86Y38 959 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 PHF13Q86YI8 300 aaPredicted RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 MIB1Q86YT6 1006 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 SLC41A1Q8IVJ1 513 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 BBS7Q8IWZ6 715 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 CCDC170Q8IYT3 715 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 NAT16Q8N8M0 369 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 CEP76Q8TAP6 659 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 KCTD13Q8WZ19 329 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 FBXO32Q969P5 355 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ARHGEF26Q96DR7 871 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ERLEC1Q96DZ1 483 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 PPP1R13BQ96KQ4 1090 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 EIF3CQ99613 913 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 SLC4A5Q9BY07 1137 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ULBP1Q9BZM6 244 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 MIS12Q9H081 205 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 THAP2Q9H0W7 228 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 ISCUQ9H1K1 167 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 PNPLA8Q9NP80 782 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 POLMQ9NP87 494 aaPredicted RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.05
MRPL55-211ENST00000366738 OSER1Q9NX31 292 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 GMIPQ9P107 970 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 MGAQ8IWI9 3026 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 SHROOM3Q8TF72 1996 aa8.52□□□□□ -1.05
MRPL55-211ENST00000366738 TCRBV5S1A1TA0A578 114 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 RTN2O75298 545 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 TBX18O95935 607 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 FTLP02792 175 aaPredicted RBP8.51□□□□□ -1.05
MRPL55-211ENST00000366738 ADH5P11766 374 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 RRM1P23921 792 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 EIF2DP41214 584 aaKnown RBP8.51□□□□□ -1.05
MRPL55-211ENST00000366738 TKTL1P51854 596 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 ZNF33AQ06730 810 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 CYP4F3Q08477 520 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 TAF5Q15542 800 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 SPDYCQ5MJ68 293 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 OLFML1Q6UWY5 402 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 TMEM110Q86TL2 294 aa8.51□□□□□ -1.05
MRPL55-211ENST00000366738 TMEM25Q86YD3 366 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms